BLASTX nr result

ID: Atractylodes21_contig00041448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041448
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...    69   7e-10
emb|CBI15935.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [M...    66   6e-09
ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M...    62   8e-08
ref|XP_003539338.1| PREDICTED: uncharacterized protein LOC100814...    57   2e-06

>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 15/114 (13%)
 Frame = -1

Query: 546 RAVVESEYCPQAVVDYYSSALG--ENFDLRKDIREM--QSRAKKHLFSVGWLMAYADELC 379
           R  ++ EYCPQAVV+YY   L   E+   + DIR +  +S+AKKHL  +GW   YA    
Sbjct: 565 RVDIDHEYCPQAVVNYYFLGLDKKEHHSRKDDIRSLNLKSKAKKHLSFMGWTFWYAYRRG 624

Query: 378 -RKVVYISPSGKKCYSLRKACNQCILE-SVSHGSN---------NASEINAGEK 250
            R++ Y SP GK  YSLR AC  C+ E   S G++         N SE+  G++
Sbjct: 625 KREMRYFSPKGKCYYSLRTACKGCMDEGGASEGTSTTWNPVKTMNVSEVALGQE 678


>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
 Frame = -1

Query: 537 VESEYCPQAVVDYYSSALGENFDLRKD--IREMQSRAKKHLFSVGWLMAYA-DELCRKVV 367
           ++ EYCP AV++YYS  L +    RKD     + ++AKKHL  +GWL  YA  +  R++ 
Sbjct: 76  IDREYCPHAVINYYSLGLDKKDYRRKDSVTSNLIAKAKKHLSFMGWLFWYAYKKGKRELR 135

Query: 366 YISPSGKKCYSLRKACNQCILESVSHGSNNASEINAGEKNEGVSQSERVKKGKNQGV 196
           Y SP G+  YSLR AC  C+ E    G++  +   +  K   VS+   V++ ++ G+
Sbjct: 136 YCSPKGRCYYSLRTACKACMDEG---GASEDTSTCSPMKIMNVSEESEVQEFRHDGL 189


>ref|XP_003625981.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500996|gb|AES82199.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 796

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
 Frame = -1

Query: 573 SYKPPPTRVRAVVESEYCPQAVVDYYSSALGENFDLRKDIR--EMQSRAKKHLFSVGWLM 400
           S  PPP      +E EYCPQAV ++Y   L    D ++  R  ++  +AK+HLF +GW  
Sbjct: 3   SRSPPP---HINIEPEYCPQAVFEWYR--LTGLKDRKESFRRKDLALKAKQHLFYLGWRF 57

Query: 399 AYADELCR-KVVYISPSGKKCYSLRKACNQCILE---SVSHGSNNA 274
            Y D+ CR ++ Y SP+ K   +LRKAC+ CI +   S+ H S  A
Sbjct: 58  WYIDKKCRWELRYTSPNAKNYTTLRKACHVCIEQGGCSLKHSSTAA 103


>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
           gi|355517044|gb|AES98667.1| Chromodomain
           helicase-DNA-binding protein [Medicago truncatula]
          Length = 1144

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = -1

Query: 558 PTRVRAVVESEYCPQAVVDYYSSALGENFDLRKDIREMQSRAKKHLFSVGWLMAYADELC 379
           P+ V+  VE E+CP A+V YY  +L  N     D R+ + +AKKHL S GW+  Y  E  
Sbjct: 510 PSPVKFQVEPEFCPLAIVKYYCHSLERN---SSDKRKWKLKAKKHLLSEGWMFDYPTERR 566

Query: 378 RKVVYISPSGKKCYSLRKACNQCILESVSHGSNN 277
           +  +Y SP  +   +L+ AC   + E +   +N+
Sbjct: 567 KTTLYKSPQDQCLGTLQGACRLYLKEKIPEWTNS 600


>ref|XP_003539338.1| PREDICTED: uncharacterized protein LOC100814680 [Glycine max]
          Length = 1120

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
 Frame = -1

Query: 561 PPTRVRAVVESE------YCPQAVVDYYSSALGENFDLRKDIREMQSRAKKHLFSVGWLM 400
           PPT   ++VE E      +CP+AV  YY S +      R D ++   +AK HL + GW+ 
Sbjct: 443 PPTISSSLVEDEVEDVPKFCPEAVEQYYRSYISNMS--RADKKQWILKAKNHLLAEGWIF 500

Query: 399 AYADELCRK--VVYISPSGKKCYSLRKACNQCILESVSH-GSNNASEINAGEKNE 244
            Y     +K  ++YISP  ++  +L  AC  C+ +S+S    ++   +N    NE
Sbjct: 501 DYPPPTNKKRGIIYISPLNRRFPTLHAACRFCMGKSISKLARSDMKHLNVSGMNE 555


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