BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041357
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   110   4e-28
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   105   2e-26
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...   102   1e-25
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      91   1e-24
gb|ACB28472.1| polyprotein [Ananas comosus]                            85   2e-22

>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  110 bits (275), Expect(2) = 4e-28
 Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
 Frame = +2

Query: 2    ADALSRVQGAEVLYMAISVISSDLTKLIQASYLEDKGLAEIIQRLKLKEPVPN--FQWHN 175
            ADALSRV+G+EVL+MA++V+  DL K IQA Y  D  L +II  L+ ++P     F W  
Sbjct: 1005 ADALSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDIITALQ-RDPDSKKYFSWSQ 1063

Query: 176  ELLRKKGKIVVGPDKNL*LKIINWQHASPESGHSGRDITVKRVKSLFYWRGLTRDVR 346
             +LR+K KIVV  + N+   I+ W H S   GHSGRD+T +RVK LFYW+G+ +D++
Sbjct: 1064 NILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQ 1120



 Score = 39.3 bits (90), Expect(2) = 4e-28
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 351  VRQCQVCQASKYETRANPGLLQPLPIP 431
            +R C  CQ  K +  A+PGLLQPLPIP
Sbjct: 1123 IRSCGTCQQCKSDPAASPGLLQPLPIP 1149


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  105 bits (262), Expect(2) = 2e-26
 Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2    ADALSRVQGAEVLYMAISVISSDLTKLIQASYLEDKGLAEIIQRLKLK-EPVPNFQWHNE 178
            ADALSRV+G+EVL+MA+S++  D  K IQ +Y  D  L +II  L+   +   ++ W  +
Sbjct: 976  ADALSRVEGSEVLHMALSIVECDFLKEIQVAYESDGVLKDIISALQQHPDAKKHYSWSQD 1035

Query: 179  LLRKKGKIVVGPDKNL*LKIINWQHASPESGHSGRDITVKRVKSLFYWRGLTRDVR 346
            +LR+K KIVV  D  +  K++ W H S   G SGRD + +RVKSLFYW+G+ +D++
Sbjct: 1036 ILRRKSKIVVPNDVEITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQ 1091



 Score = 38.5 bits (88), Expect(2) = 2e-26
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +3

Query: 351  VRQCQVCQASKYETRANPGLLQPLPIP 431
            +R C  CQ  K +  A PGLLQPLPIP
Sbjct: 1094 IRSCGTCQQCKSDNAAYPGLLQPLPIP 1120


>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score =  102 bits (253), Expect(2) = 1e-25
 Identities = 51/116 (43%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   ADALSRVQGAEVLYMAISVISSDLTKLIQASYLEDKGLAEIIQRLKLK-EPVPNFQWHNE 178
           ADALSRV+G+EVL+MA+SV+  DL K IQA Y+ D  +  II  L+ + +   ++ W   
Sbjct: 396 ADALSRVEGSEVLHMALSVVECDLLKEIQAGYVTDGDIQGIITILQQQADSKKHYTWSQG 455

Query: 179 LLRKKGKIVVGPDKNL*LKIINWQHASPESGHSGRDITVKRVKSLFYWRGLTRDVR 346
           +LR+K KIVV  +  +   I+ W H S   GHSG+++T +RVK LFYW+ + +D++
Sbjct: 456 VLRRKNKIVVPNNSGIKDTILRWLHCSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQ 511



 Score = 39.7 bits (91), Expect(2) = 1e-25
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 351 VRQCQVCQASKYETRANPGLLQPLPIP 431
           +R C  CQ  K +  A+PGLLQPLPIP
Sbjct: 514 IRSCGTCQQCKSDNAASPGLLQPLPIP 540


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 91.3 bits (225), Expect(2) = 1e-24
 Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2    ADALSRVQGAEVLYMAISVISSDLTKLIQASYLEDKGLAEIIQRLKLKEPV-PNFQWHNE 178
            ADALSRV GA++L + +S     L   IQ  +  D  L+++I  +K      P + + NE
Sbjct: 1061 ADALSRVTGAQLLSITLSHAHEGLFDSIQLLWQSDPHLSKVISDIKSNPASHPAYSFVNE 1120

Query: 179  LLRKKGKIVVGPDKNL*LKIINWQHASPESGHSGRDITVKRVKSLFYWRGLTRDVR 346
             LR+KGK+VVG D  + L I+ W H S   GHSGRD T++R+K+LFYW  ++ +V+
Sbjct: 1121 ELRRKGKLVVGNDAAVKLHILKWMHDSVSGGHSGRDATLQRIKALFYWSKMSLEVQ 1176



 Score = 47.0 bits (110), Expect(2) = 1e-24
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = +3

Query: 351  VRQCQVCQASKYETRANPGLLQPLPIP 431
            +R CQ+CQ +KY+  A+PGLLQPLP+P
Sbjct: 1179 IRNCQICQKNKYDLAASPGLLQPLPVP 1205


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 84.7 bits (208), Expect(2) = 2e-22
 Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   ADALSRVQGAEVLYMAISVISSDLTKLIQASYLEDKGLAEIIQRLKLK-EPVPNFQWHNE 178
           ADALSR        +A+S I +DL   I+ S+  D  L +IIQ+ +      P + W  +
Sbjct: 633 ADALSR----SPTLLAVSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQD 688

Query: 179 LLRKKGKIVVGPDKNL*LKIINWQHASPESGHSGRDITVKRVKSLFYWRGLTRDVRQ 349
            LR+KGK+VVG D  L L++I+  HAS   GHSG + T +++K  FYW+GL RDV Q
Sbjct: 689 QLRRKGKLVVGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQ 745



 Score = 46.2 bits (108), Expect(2) = 2e-22
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 351 VRQCQVCQASKYETRANPGLLQPLPIP 431
           VR+C VCQ +KYET A  GLLQPLPIP
Sbjct: 747 VRECSVCQQNKYETTAPAGLLQPLPIP 773