BLASTX nr result

ID: Atractylodes21_contig00041346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041346
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicag...    42   1e-06
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...    42   2e-06
emb|CBI20740.3| unnamed protein product [Vitis vinifera]               38   8e-06
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...    38   8e-06

>ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
           gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like
           protein [Medicago truncatula]
          Length = 1758

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   EIVKNDVMVMTPQRCQILMDALRNVFVNFEMI--LAIDEVH 117
           EI  NDVMVMTP   QIL+DA R  F++ EMI  + IDE H
Sbjct: 145 EISDNDVMVMTP---QILLDAFRKAFLSIEMICLMVIDECH 182



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 5/36 (13%)
 Frame = +3

Query: 123 TGLHPY-----EFYIKADDKPKVFGMTESSD*ERAI 215
           +G HPY     EFY +A++KPK+FGMT S   +R +
Sbjct: 185 SGNHPYAKIMAEFYHQANEKPKIFGMTASPVGKRGV 220


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   EIVKNDVMVMTPQRCQILMDALRNVFVNFEMI--LAIDEVH 117
           EI  NDV+VMTPQ   IL+DALR  F+  EMI  + IDE H
Sbjct: 161 EISNNDVLVMTPQ---ILLDALRKAFLRMEMICLIVIDECH 198



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 5/28 (17%)
 Frame = +3

Query: 126 GLHPY-----EFYIKADDKPKVFGMTES 194
           G HPY     EFY +A++KPK+FGMT S
Sbjct: 202 GNHPYTKIMKEFYHQANEKPKIFGMTAS 229


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   EIVKNDVMVMTPQRCQILMDALRNVFVNFEMI--LAIDEVH 117
           EI ++DV+VMTPQ   IL+DALR  F++ E +  + +DE H
Sbjct: 149 EISEHDVLVMTPQ---ILLDALRKAFLSLETVCLMIVDECH 186



 Score = 36.6 bits (83), Expect(2) = 8e-06
 Identities = 18/29 (62%), Positives = 20/29 (68%), Gaps = 5/29 (17%)
 Frame = +3

Query: 123 TGLHPY-----EFYIKADDKPKVFGMTES 194
           TG HPY     EFY K+ DKPK+FGMT S
Sbjct: 189 TGNHPYTKIMKEFYHKSVDKPKIFGMTAS 217


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   EIVKNDVMVMTPQRCQILMDALRNVFVNFEMI--LAIDEVH 117
           EI ++DV+VMTPQ   IL+DALR  F++ E +  + +DE H
Sbjct: 141 EISEHDVLVMTPQ---ILLDALRKAFLSLETVCLMIVDECH 178



 Score = 36.6 bits (83), Expect(2) = 8e-06
 Identities = 18/29 (62%), Positives = 20/29 (68%), Gaps = 5/29 (17%)
 Frame = +3

Query: 123 TGLHPY-----EFYIKADDKPKVFGMTES 194
           TG HPY     EFY K+ DKPK+FGMT S
Sbjct: 181 TGNHPYTKIMKEFYHKSVDKPKIFGMTAS 209


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