BLASTX nr result

ID: Atractylodes21_contig00041235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041235
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222...   112   2e-23
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    99   4e-19
dbj|BAG70995.1| uncharacterized protein [Musa balbisiana] gi|199...    80   2e-13
gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indi...    78   8e-13

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/155 (49%), Positives = 93/155 (60%), Gaps = 17/155 (10%)
 Frame = -3

Query: 414 QELNYCDTTSNKDLYDTSGSKDRMT---CEAAGLAE-----IVGKDNGV-SRMGT--SIC 268
           QE   C+T  N+DL D+S  KDR     C   G AE     I  K+  + S+ G   + C
Sbjct: 388 QEFCSCNTKINQDLNDSSAHKDRGELEGCMTTGYAEKCESKIKEKEFHLDSQTGDDHNTC 447

Query: 267 NACKLGGKLRYCDAVVCNRCYHLSCLDLPVNNVPSGNWRCPFCVANIKSSIRV------I 106
             CKLGGKL  CD   C R YHL+CLD P+  +P G W C  CV   K+ + V      +
Sbjct: 448 VVCKLGGKLLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKK-KTELGVHAVSEGV 506

Query: 105 ESIWDTREVEVSGAEGLQKQKQYFVKYKGLAHIHN 1
           ESIWDTREVE+  AEG+QKQKQYFVKYKGLAH+HN
Sbjct: 507 ESIWDTREVELPSAEGVQKQKQYFVKYKGLAHVHN 541


>ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
          Length = 2887

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/95 (54%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
 Frame = -3

Query: 270 CNACKLGGKLRYCDAVVCNRCYHLSCLDLPVNNVPSGNWRCPFCV-ANIKSSIRVI---- 106
           C  CK+GGKL  C+   C R +HLSCLD P+ +VP G W CP C+   IK  +  +    
Sbjct: 640 CLICKVGGKLLCCEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKFGVYAVSKGF 699

Query: 105 ESIWDTREVEVSGAEGLQKQKQYFVKYKGLAHIHN 1
           ESIWDTRE E+S A+G Q+QKQYFVK+K LAH HN
Sbjct: 700 ESIWDTRETEISDADGSQRQKQYFVKFKDLAHAHN 734


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = -3

Query: 357 SKDRMTCEAAGLAEIVGKDNGVSRMGTSICNACKLGGKLRYCDAVVCNRCYHLSCLDLPV 178
           + D  T  +  +A+    +NG +    S+        + R CD   C R YHLSCLD P+
Sbjct: 339 NSDATTMVSNKVADAAPYENGRT---DSVAKCATSSKRQRCCDGQGCKRSYHLSCLDPPL 395

Query: 177 NNVPSGNWRCPFCVAN-----IKSSIRVIESIWDTREVEVSGAEGLQKQKQYFVKYKGLA 13
            +VP G W C  CV       + S  + IESIWD  EVEV+   G+Q+QKQ++VKYKGLA
Sbjct: 396 GDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEVADDNGVQRQKQFYVKYKGLA 455

Query: 12  HIHN 1
           H+HN
Sbjct: 456 HVHN 459


>dbj|BAG70995.1| uncharacterized protein [Musa balbisiana]
           gi|199601726|dbj|BAG70985.1| uncharacterized protein
           [Musa balbisiana]
          Length = 405

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/99 (42%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = -3

Query: 282 GTSICNACKLGGKLRYCDAVVCNRCYHLSCLDLPVNNVPSGNWRCPFCVA-----NIKSS 118
           G + C  C+       CD   CNR YHLSCLD P+ +   G W C FC+       + S 
Sbjct: 162 GPTTCVVCRRPETDLSCDGKGCNRSYHLSCLDPPLQDTLPGVWLCIFCIKRKIEFGVYSV 221

Query: 117 IRVIESIWDTREVEVSGAEGLQKQKQYFVKYKGLAHIHN 1
              I+SIW+ +       EGLQ  K+Y VKYKGLAH+HN
Sbjct: 222 SEGIDSIWNIK-------EGLQTGKRYLVKYKGLAHVHN 253


>gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indica Group]
          Length = 2670

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = -3

Query: 279 TSICNACKLGGKLRYCDAVVCNRCYHLSCLDLPVNNVPSGNWRCPFC-----VANIKSSI 115
           ++IC AC   G L+ CD   C R YH+SCLD  +  +  G W C  C     +  I S  
Sbjct: 317 SNICVACGTPGDLKSCDGEGCKRSYHVSCLDHWLEYLSPGMWFCTVCTEKRLLFGIHSVA 376

Query: 114 RVIESIWDTREVEVSGAEGLQKQKQYFVKYKGLAHIHN 1
             IES+W+ +       EG+Q  KQY VKYK LAH+HN
Sbjct: 377 DGIESLWNVK-------EGMQNGKQYLVKYKNLAHVHN 407


Top