BLASTX nr result

ID: Atractylodes21_contig00041222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041222
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   142   4e-32
ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/103 (68%), Positives = 82/103 (79%)
 Frame = +3

Query: 3   KLRDALEIFDRMKLQGLKPDAGLYWKIIDVFCDAKKFQEAANFLDEMVFEGIPIQRVTWG 182
           KL++A+EI DRMKLQGL+PDAGLY KII  FCD  KF EAANFLDEMV  GI   R+TW 
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370

Query: 183 LHVKIHNTVVQGLCSTNDSNRAFQLYHSTRTKGICVDAETYES 311
           LHV+IHN VVQGLC T   NRAFQLY S RT+GI +DA+T++S
Sbjct: 371 LHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDS 412


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/103 (68%), Positives = 82/103 (79%)
 Frame = +3

Query: 3   KLRDALEIFDRMKLQGLKPDAGLYWKIIDVFCDAKKFQEAANFLDEMVFEGIPIQRVTWG 182
           KL++A+EI DRMKLQGL+PDAGLY KII  FCD  KF EAANFLDEMV  GI   R+TW 
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370

Query: 183 LHVKIHNTVVQGLCSTNDSNRAFQLYHSTRTKGICVDAETYES 311
           LHV+IHN VVQGLC T   NRAFQLY S RT+GI +DA+T++S
Sbjct: 371 LHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDS 412


>ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
           gi|449484609|ref|XP_004156929.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/103 (63%), Positives = 79/103 (76%)
 Frame = +3

Query: 3   KLRDALEIFDRMKLQGLKPDAGLYWKIIDVFCDAKKFQEAANFLDEMVFEGIPIQRVTWG 182
           K+ +ALEIFDRMKLQG KPDAGLY KI++  CD  +FQEAANFLDEMV  GI   R+TW 
Sbjct: 340 KINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWS 399

Query: 183 LHVKIHNTVVQGLCSTNDSNRAFQLYHSTRTKGICVDAETYES 311
           LHV+ HN V+ GLC+ N+SNRAFQLY S  T+GI +  +T+ S
Sbjct: 400 LHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNS 442


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/103 (63%), Positives = 80/103 (77%)
 Frame = +3

Query: 3   KLRDALEIFDRMKLQGLKPDAGLYWKIIDVFCDAKKFQEAANFLDEMVFEGIPIQRVTWG 182
           KL +A+E  DRMKLQGLKPDAGLY KII+ FC+ +KFQEAA +LDEMV   I   RVTW 
Sbjct: 311 KLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS 370

Query: 183 LHVKIHNTVVQGLCSTNDSNRAFQLYHSTRTKGICVDAETYES 311
           LHVK++N VVQGLC+  + NR+FQLY   RT+GI +DA T++S
Sbjct: 371 LHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDS 413


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/102 (59%), Positives = 77/102 (75%)
 Frame = +3

Query: 3   KLRDALEIFDRMKLQGLKPDAGLYWKIIDVFCDAKKFQEAANFLDEMVFEGIPIQRVTWG 182
           KLR+A+EI DRM++QGLKP+AGLY KII   C A  +QEAANF+DEMV  GI   R +W 
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWS 370

Query: 183 LHVKIHNTVVQGLCSTNDSNRAFQLYHSTRTKGICVDAETYE 308
           LHV++HN VVQGLC+  D  RAFQLY S RT+ I V+ +T++
Sbjct: 371 LHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFD 412


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