BLASTX nr result

ID: Atractylodes21_contig00041221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041221
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]    72   4e-11
ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]          64   1e-08
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -1

Query: 495 ETYESLITLFCKKQDLYKAVHVFDEMVIDGCTPSEGTWGDLVCRVWGKQKAQGAADLM 322
           +T++SL+  FC K DL+KA H+ DEMV+DGC P E TW  +VC  W ++K + +A+L+
Sbjct: 408 KTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465


>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -1

Query: 495 ETYESLITLFCKKQDLYKAVHVFDEMVIDGCTPSEGTWGDLVCRVWGKQKAQGAADLM 322
           +T++SL+  FC K DL+KA H+ DEMV+DGC P E TW  +VC  W ++K + +A+L+
Sbjct: 408 KTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
 Frame = -1

Query: 492 TYESLITLFCKKQDLYKAVHVFDEMVIDGCTPSEGTWGDLVCRVWGKQKAQGA-----AD 328
           T++SL+  FCKK DL+KA  +FDEMV+DGC P  G W  +V   W ++K + A      +
Sbjct: 410 TFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVE 469

Query: 327 LMSELV 310
           LM+E V
Sbjct: 470 LMNEFV 475


>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = -1

Query: 492 TYESLITLFCKKQDLYKAVHVFDEMVIDGCTPSEGTWGDLVCRVWGKQKAQGAADLM 322
           T++ L+  FCK+ DL KA  + +EM++DGC P EG W  L+C +W ++K +   +L+
Sbjct: 410 TFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -1

Query: 495 ETYESLITLFCKKQDLYKAVHVFDEMVIDGCTPSEGTWGDLVCRVWGKQKAQGAAD-LMS 319
           +T++ L+  FCK+ DL+KA  + +EMV+DGC P EG W  ++  +W ++K + A + L+ 
Sbjct: 409 DTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLV 468

Query: 318 EL 313
           EL
Sbjct: 469 EL 470


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