BLASTX nr result

ID: Atractylodes21_contig00041151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041151
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81066.1| hypothetical protein VITISV_032536 [Vitis vinifera]    60   2e-07
ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>emb|CAN81066.1| hypothetical protein VITISV_032536 [Vitis vinifera]
          Length = 365

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
 Frame = -2

Query: 285 SRGAWGGVIKVVKLINSMGLVFMDSFGKMVGNGLSTSFWKDKWIGNFKLCDKYPWLFRLD 106
           +R A+G  + + K I+ MG +    FG +VGNG + SFWKDKW GN  LC+ +P LF L 
Sbjct: 206 AREAYG--VGLWKAISKMGQLVTPLFGFVVGNGKNVSFWKDKWCGNTPLCEIFPSLFALA 263

Query: 105 RDADSVV--------FNRFRWIQGYQEWFWDWIRDPRGR 13
              ++ +          R  W   +   F DW  +  GR
Sbjct: 264 TSKEAWINEVWTAEGERRGSWTPHFNRPFNDWEMEEVGR 302


>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
 Frame = -2

Query: 201  MVGNGLSTSFWKDKWIGNFKLCDKYPWLFRLDRDADSVV-----FNRFRWIQGYQEWFWD 37
            ++GNG  T FW D WI N+ L D +P LF L  D D+ +     ++ F WI     WF+ 
Sbjct: 877  LIGNGKRTVFWLDTWIDNYCLVDCFPNLFHLSNDKDASIDKMGMWDGFEWI-----WFFS 931

Query: 36   WIRDPRGRARG 4
            WIR  RGR  G
Sbjct: 932  WIRPLRGRNIG 942


Top