BLASTX nr result

ID: Atractylodes21_contig00041127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041127
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    89   4e-21
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    62   3e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    81   8e-14
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    52   1e-11
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    52   5e-11

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 88.6 bits (218), Expect(2) = 4e-21
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = +2

Query: 113 PLTLGNSGLILGIQWLEKLGHVTTNGKTQVMTFKVNNHPITLKGEPSLDRSQITLKTMWR 292
           PLTLGNS LILG+QWLEKLG + TN KTQ + +K  N  +TL+G P+L R++++LK M+R
Sbjct: 496 PLTLGNSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYR 555

Query: 293 AILKEGG 313
            + KEGG
Sbjct: 556 TLRKEGG 562



 Score = 37.7 bits (86), Expect(2) = 4e-21
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +3

Query: 12  FDVCLGTGKAVQGKGECQGLLLHVQGLEIKDNFL 113
           F V LGTG    G+GEC+ + LH+QG+ + +++L
Sbjct: 462 FGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYL 495


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 61.6 bits (148), Expect(2) = 3e-14
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +2

Query: 107 FPPLTLGNSGLILGIQWLEKLGHVTTNGKTQVMTFKVNNHPITLKGEPSLDRSQITLKTM 286
           F PL LGN+ +ILG+ WL  LG V  N K   M  K+    I LKG+PSL R +++LK M
Sbjct: 75  FLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVIVLKGDPSLSRIEVSLKAM 134

Query: 287 WRAI 298
            RA+
Sbjct: 135 TRAL 138



 Score = 41.2 bits (95), Expect(2) = 3e-14
 Identities = 16/37 (43%), Positives = 28/37 (75%)
 Frame = +3

Query: 3   TVEFDVCLGTGKAVQGKGECQGLLLHVQGLEIKDNFL 113
           T  ++V +GTG +V+GKG C+G+ + +QGL + ++FL
Sbjct: 40  TTSYEVMMGTGISVKGKGICRGVCISMQGLTVVEDFL 76


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = +2

Query: 107 FPPLTLGNSGLILGIQWLEKLGHVTTNGKTQVMTFKVNNHPITLKGEPSLDRSQITLKTM 286
           F PL LGNS +ILG+QWLE LG V +N KTQ M+F++   P TL G+P+L RS+++LK M
Sbjct: 558 FLPLGLGNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAM 617

Query: 287 WRAILKEGG 313
            R + KEGG
Sbjct: 618 LRTLRKEGG 626


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 52.0 bits (123), Expect(2) = 1e-11
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = +2

Query: 107 FPPLTLGNSGLILGIQWLEKLGHVTTNGKTQVMTFKVNNHPITLKGEPSLDRSQITLKTM 286
           F PL LG+  ++LG+QWL K G +T + +   MTF V +  + L+G+ SL R  I+LK +
Sbjct: 444 FLPLELGHLDMVLGMQWLPKQGAMTVDWRNLAMTFAVRDVKVMLRGDLSLTRMAISLKML 503

Query: 287 WR 292
            +
Sbjct: 504 MK 505



 Score = 42.4 bits (98), Expect(2) = 1e-11
 Identities = 17/37 (45%), Positives = 28/37 (75%)
 Frame = +3

Query: 3   TVEFDVCLGTGKAVQGKGECQGLLLHVQGLEIKDNFL 113
           T ++ V +G+GKAVQGKG C G+++ + GL + ++FL
Sbjct: 409 TTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFL 445


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 51.6 bits (122), Expect(2) = 5e-11
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +2

Query: 107 FPPLTLGNSGLILGIQWLEKLGHVTTNGKTQVMTFKVNNHPITLKGEPSLDRSQITLKTM 286
           F PL LG    +LG+QWL  LG    + K   MTF  N   + +KG+PSL ++ + LK M
Sbjct: 491 FLPLELGGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTKAMVGLKNM 550

Query: 287 ---WR 292
              WR
Sbjct: 551 IKSWR 555



 Score = 40.4 bits (93), Expect(2) = 5e-11
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +3

Query: 3   TVEFDVCLGTGKAVQGKGECQGLLLHVQGLEIKDNFL 113
           T  + V LG+G AV+GKG C+G+ L ++G +++ NFL
Sbjct: 456 TSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFL 492


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