BLASTX nr result

ID: Atractylodes21_contig00041116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041116
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...   118   6e-25
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...   117   8e-25
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...   117   1e-24
gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...   115   3e-24
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...   115   4e-24

>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/129 (41%), Positives = 81/129 (62%)
 Frame = -3

Query: 387  ADDAILIGDWDETNMDTICKALRFFYCISGLNINFDKSAIIGVGVRIDDVTTMAGRFGCK 208
            ADD ++  + +  ++  I K L  F  +SGL +NF KS+++G+ V    +   A    CK
Sbjct: 680  ADDTLMFCEANTNSLKNIQKTLIIFQLVSGLQVNFHKSSLMGLNVTSSWIQEAANSLMCK 739

Query: 207  PDSLPFKYLGIPIGGRTGSITTWDPIVAKFKQKLAGWKANLLSMGGRATLVSAVLGSLGI 28
              ++PF YLG+PIG     I TWDPI+ K ++KLA WK  LLS+GGR TL+ A L +L +
Sbjct: 740  IGTIPFSYLGLPIGDNPARIRTWDPIIDKLEKKLASWKGKLLSLGGRLTLIKASLSNLPL 799

Query: 27   YFLSIFKIP 1
            Y++S+F +P
Sbjct: 800  YYMSLFPVP 808


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/129 (44%), Positives = 81/129 (62%)
 Frame = -3

Query: 387  ADDAILIGDWDETNMDTICKALRFFYCISGLNINFDKSAIIGVGVRIDDVTTMAGRFGCK 208
            ADD I+        +  I K L  F   SGL +NF KS+++GV V  + +   A    CK
Sbjct: 679  ADDTIIFCPPKLEFLSNIKKTLILFQLASGLQVNFHKSSLLGVNVHENLLNDFAKHLLCK 738

Query: 207  PDSLPFKYLGIPIGGRTGSITTWDPIVAKFKQKLAGWKANLLSMGGRATLVSAVLGSLGI 28
               LPF YLG+PIGG    ++ WDP+++K ++KLA WK+NLLS+GGR TL+ A L +L +
Sbjct: 739  VGKLPFTYLGLPIGGNITRLSLWDPVISKLEKKLASWKSNLLSIGGRLTLIKACLSNLPL 798

Query: 27   YFLSIFKIP 1
            Y++S+F IP
Sbjct: 799  YYMSLFPIP 807


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447  RDNIWK--VASFSDPH*CQMVRADDAILIGDWDETNMDTICKALRFFYCISGLNINFDKS 274
            R N+W+    S   P    +  ADD ++  D    ++ +I   L  F  +SGL +NF KS
Sbjct: 657  RLNLWRGIETSRDGPMISHLQYADDTLVFSDTSTDSLKSIKSTLILFQLVSGLQVNFHKS 716

Query: 273  AIIGVGVRIDDVTTMAGRFGCKPDSLPFKYLGIPIGGRTGSITTWDPIVAKFKQKLAGWK 94
            ++IG+ +        A    CK  S+PF YLG+PIGG    I  W P++ K  +KLA WK
Sbjct: 717  SLIGLNISDARANNAANLLQCKVGSIPFTYLGLPIGGNPSRIQFWKPVIEKLCEKLAMWK 776

Query: 93   ANLLSMGGRATLVSAVLGSLGIYFLSIFKIP 1
            + +LS+GGR TL+ + L SL +YF+S+F IP
Sbjct: 777  SKMLSIGGRLTLIKSSLASLPLYFMSLFPIP 807


>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/129 (43%), Positives = 78/129 (60%)
 Frame = -3

Query: 387 ADDAILIGDWDETNMDTICKALRFFYCISGLNINFDKSAIIGVGVRIDDVTTMAGRFGCK 208
           ADD +L+G+    N+  +   L  F  +SGL INF KS ++GV V    +T  A    CK
Sbjct: 91  ADDTLLLGEKSWANVRALRTVLILFEAVSGLKINFHKSLLVGVNVADSWLTEAASLLNCK 150

Query: 207 PDSLPFKYLGIPIGGRTGSITTWDPIVAKFKQKLAGWKANLLSMGGRATLVSAVLGSLGI 28
             SLPF YLG+PIGG    ++ W+P+V + K +L+ W++  LS GGR  LV +VL +L +
Sbjct: 151 VGSLPFTYLGLPIGGNPRRLSFWEPVVHRIKSRLSSWQSRFLSFGGRLILVKSVLSALPV 210

Query: 27  YFLSIFKIP 1
           Y LS FK P
Sbjct: 211 YALSFFKAP 219


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/129 (47%), Positives = 79/129 (61%)
 Frame = -3

Query: 387  ADDAILIGDWDETNMDTICKALRFFYCISGLNINFDKSAIIGVGVRIDDVTTMAGRFGCK 208
            ADD I+        +  I K L  F   SGL++NF KSA+ G+ V    + T A    C+
Sbjct: 679  ADDTIIFCPPSMEYLCNIKKTLIAFQLASGLSVNFHKSALYGINVDHLWLETAAKTLLCR 738

Query: 207  PDSLPFKYLGIPIGGRTGSITTWDPIVAKFKQKLAGWKANLLSMGGRATLVSAVLGSLGI 28
              SLPFKYLG+PIGG    I TWDPIV +  ++LA WK  +LS+GGR TL+ A L SL +
Sbjct: 739  TGSLPFKYLGLPIGGNLSRIDTWDPIVDRMGKRLATWKGKMLSIGGRITLIKASLSSLPL 798

Query: 27   YFLSIFKIP 1
            YF+S+F IP
Sbjct: 799  YFMSLFPIP 807


Top