BLASTX nr result

ID: Atractylodes21_contig00041101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041101
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...    62   6e-08
ref|XP_002530606.1| nuclear protein skip, putative [Ricinus comm...    62   6e-08
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...    60   2e-07
ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CBI28015.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
 Frame = +3

Query: 3   KVGSGGTMKASGGSSMREGYE-GSGRTRIGFERG 101
           KVGSGGTM+A GGSSMR+GYE GSGRTRIGFERG
Sbjct: 569 KVGSGGTMRAGGGSSMRDGYEGGSGRTRIGFERG 602


>ref|XP_002530606.1| nuclear protein skip, putative [Ricinus communis]
           gi|223529854|gb|EEF31786.1| nuclear protein skip,
           putative [Ricinus communis]
          Length = 238

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/35 (85%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +3

Query: 3   KVGSGGTMKASGGSSMREGYE-GSGRTRIGFERGR 104
           KVGSGGTM+ASGGSS R+GY+ GSGRTRIGFERGR
Sbjct: 204 KVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERGR 238


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
 Frame = +3

Query: 3   KVGSGGTMKASGGSSMREGYE-GSGRTRIGFERG 101
           KVGSGGTM+ASGGSS R+GY+ GSGRTRIGFERG
Sbjct: 571 KVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERG 604


>ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|222832076|gb|EEE70553.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +3

Query: 3   KVGSGGTMKASGGSSMREGYE-GSGRTRIGFERGR 104
           KVGSGGTM+ASGGSS R+G++ GSGRTRIGFERGR
Sbjct: 562 KVGSGGTMRASGGSSTRDGHDGGSGRTRIGFERGR 596


>emb|CBI28015.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +3

Query: 3   KVGSGGTMKASGGSSMREGYE-GSGRTRIGFERGR 104
           KVG+GGTM+AS GSSMR+G++ GSGRTRIGFERGR
Sbjct: 501 KVGTGGTMRASAGSSMRDGHDGGSGRTRIGFERGR 535


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