BLASTX nr result

ID: Atractylodes21_contig00041097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041097
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249...   106   2e-21
ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802...   105   5e-21
ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002332948.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_002517135.1| structural constituent of ribosome, putative...   104   8e-21

>ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
           gi|297737055|emb|CBI26256.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/69 (79%), Positives = 60/69 (86%)
 Frame = -1

Query: 439 RATSKVVAVAHSISKDMKFDLGSTKNXXXXXAVGKVLAQRALADDIHNVVYTPRKGEKLE 260
           R TSKVVAVAHSISKDMKFDL ST+N     AVG++LAQRALADDIH+ VYTPRKG+KLE
Sbjct: 249 RVTSKVVAVAHSISKDMKFDLTSTRNVTACAAVGRILAQRALADDIHDTVYTPRKGDKLE 308

Query: 259 GKLQNVLQS 233
           GKLQ VLQS
Sbjct: 309 GKLQIVLQS 317


>ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
          Length = 329

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/69 (78%), Positives = 59/69 (85%)
 Frame = -1

Query: 439 RATSKVVAVAHSISKDMKFDLGSTKNXXXXXAVGKVLAQRALADDIHNVVYTPRKGEKLE 260
           R TSKVVAVAHSISKD KFDL STKN     AVG +LAQRALADDIH++VYTPRKGE++E
Sbjct: 238 RVTSKVVAVAHSISKDFKFDLASTKNKTTCAAVGAILAQRALADDIHDIVYTPRKGERVE 297

Query: 259 GKLQNVLQS 233
           GKLQ VLQS
Sbjct: 298 GKLQIVLQS 306


>ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|222851448|gb|EEE88995.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%)
 Frame = -1

Query: 439 RATSKVVAVAHSISKDMKFDLGSTKNXXXXXAVGKVLAQRALADDIHNVVYTPRKGEKLE 260
           R TSKVVAVAHSISKD KFDL STKN     AVG +LAQRALADDIH+VVYTPRKGE+LE
Sbjct: 252 RVTSKVVAVAHSISKDFKFDLASTKNATACAAVGGILAQRALADDIHDVVYTPRKGERLE 311

Query: 259 GKLQNVLQS 233
           GKLQ VLQ+
Sbjct: 312 GKLQIVLQA 320


>ref|XP_002332948.1| predicted protein [Populus trichocarpa] gi|222834260|gb|EEE72737.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score =  104 bits (260), Expect = 6e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%)
 Frame = -1

Query: 439 RATSKVVAVAHSISKDMKFDLGSTKNXXXXXAVGKVLAQRALADDIHNVVYTPRKGEKLE 260
           R TSKVVAVAHSISKD KFDL STKN     AVG +LAQRALADDIH+VVYTPRKGE+LE
Sbjct: 31  RETSKVVAVAHSISKDFKFDLASTKNAAACAAVGGILAQRALADDIHDVVYTPRKGERLE 90

Query: 259 GKLQNVLQS 233
           GKLQ VLQ+
Sbjct: 91  GKLQIVLQA 99


>ref|XP_002517135.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543770|gb|EEF45298.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 140

 Score =  104 bits (259), Expect = 8e-21
 Identities = 54/69 (78%), Positives = 58/69 (84%)
 Frame = -1

Query: 439 RATSKVVAVAHSISKDMKFDLGSTKNXXXXXAVGKVLAQRALADDIHNVVYTPRKGEKLE 260
           R TSKVVAVAHSISKD+KFDL ST+N      VG VLAQRALADDIH+V+YT RKGEKLE
Sbjct: 46  RVTSKVVAVAHSISKDLKFDLSSTRNVAACATVGAVLAQRALADDIHDVIYTQRKGEKLE 105

Query: 259 GKLQNVLQS 233
           GKLQ VLQS
Sbjct: 106 GKLQIVLQS 114


Top