BLASTX nr result

ID: Atractylodes21_contig00041075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041075
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    58   2e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    71   1e-10
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    62   6e-08
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    62   6e-08
emb|CAN70500.1| hypothetical protein VITISV_020483 [Vitis vinifera]    60   2e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 58.2 bits (139), Expect(2) = 2e-11
 Identities = 26/46 (56%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   CKAVRVEVQG-VLIYDDFLPLALGSADMILGV*WLEQLGTVTTNWK 136
           C+AV + + G +++ +DFLPL LG++D+ILGV WLE LGTV +NWK
Sbjct: 541 CRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTVVSNWK 586



 Score = 35.0 bits (79), Expect(2) = 2e-11
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 172 TLKGEPSLEKSPVSLKAMFRALQKRG 249
           TL G+P+L +S VSLKAM R L+K G
Sbjct: 600 TLTGDPTLARSKVSLKAMLRTLRKEG 625


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   CKAVRVEVQGVLIYDDFLPLALGSADMILGV*WLEQLGTVTTNWK-QLMKLKVQKKR*LS 178
           CKAV + +QGV + +D+LPL LG++D+ILGV WLE+LGT+ TNWK Q ++ K   +    
Sbjct: 478 CKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTL 537

Query: 179 KGNRHWKSLRYP*KPCFGHCRKEG 250
           +GN          K  +   RKEG
Sbjct: 538 RGNPALSRTEVSLKAMYRTLRKEG 561


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2    CKAVRVEVQGVLIYDDFLPLALGSADMILGV*WLEQLGTVTTNWKQL-MKLKVQKKR*LS 178
            C+ V + +QG+ + +DFLPL LG+ D+ILG+ WL  LG V  NWK L MK+K+ K   + 
Sbjct: 1117 CRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVL 1176

Query: 179  KGN 187
            KG+
Sbjct: 1177 KGD 1179


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   CKAVRVEVQGVLIYDDFLPLALGSADMILGV*WLEQLGTVTTNWKQL-MKLKVQKKR*LS 178
           C+ V + +QG+ + +DFLPL LG+ D+ILG+ WL  LG V  NWK L MK+K+ K   + 
Sbjct: 59  CRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVIVL 118

Query: 179 KGN 187
           KG+
Sbjct: 119 KGD 121


>emb|CAN70500.1| hypothetical protein VITISV_020483 [Vitis vinifera]
          Length = 672

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   CKAVRVEVQGVLIYDDFLPLALGSADMILGV*WLEQLGTVTTNWKQL-MKLKVQK 163
           CK V + +QG+++ +DF+PL LGS D+ILG+ WL  LG V  NW  L +K+K+ K
Sbjct: 203 CKGVCISMQGLIVVEDFVPLELGSTDVILGMPWLGTLGDVEVNWNMLTIKIKIGK 257


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