BLASTX nr result

ID: Atractylodes21_contig00041047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041047
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   176   2e-42
emb|CAN81848.1| hypothetical protein VITISV_036819 [Vitis vinifera]   175   3e-42
ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   168   4e-40
ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycin...   167   8e-40
gb|AFK35251.1| unknown [Medicago truncatula]                          166   1e-39

>ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
           gi|296081383|emb|CBI16816.3| unnamed protein product
           [Vitis vinifera]
          Length = 442

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/138 (63%), Positives = 99/138 (71%), Gaps = 14/138 (10%)
 Frame = -1

Query: 373 FDDNIPTRAFDNFQFVNFTDIMSKNVDPLKKQTEFALTALMEIPSQYKATLELNLLGRRT 194
           FDDNIP RAFDNFQFVNFT+IMSKNVD  + QTEFAL ALMEIPSQYKAT++LN LG R 
Sbjct: 279 FDDNIPARAFDNFQFVNFTEIMSKNVDSSRTQTEFALAALMEIPSQYKATIDLNTLGVRR 338

Query: 193 GCAPDTIPLPPPCGGNSRFRN--------------QSVRDYRHNETTSPSSNSIYDNKVC 56
           G AP  + LPPP  G   F +              +S  +Y    +T PSSNS+YDNKVC
Sbjct: 339 GNAPTRVALPPPQYGTPSFSSSSKPYHSNSFQKSAESYPEYEAAVSTGPSSNSLYDNKVC 398

Query: 55  PVCLSNPKDMAFGCGHQT 2
           P+CLSNPKDMAFGCGHQT
Sbjct: 399 PICLSNPKDMAFGCGHQT 416


>emb|CAN81848.1| hypothetical protein VITISV_036819 [Vitis vinifera]
          Length = 440

 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/137 (63%), Positives = 99/137 (72%), Gaps = 14/137 (10%)
 Frame = -1

Query: 373 FDDNIPTRAFDNFQFVNFTDIMSKNVDPLKKQTEFALTALMEIPSQYKATLELNLLGRRT 194
           FDDNIP RAFDNFQFVNFT+IMSKNVD  + QTEFAL ALMEIPSQYKAT++LN LG R 
Sbjct: 273 FDDNIPARAFDNFQFVNFTEIMSKNVDSSRTQTEFALAALMEIPSQYKATIDLNTLGVRR 332

Query: 193 GCAPDTIPLPPPCGGNSRFRN--------------QSVRDYRHNETTSPSSNSIYDNKVC 56
           G AP+ + LPPP  G   F +              +S  +Y    +T PSSNS+YDNKVC
Sbjct: 333 GNAPNRVALPPPQYGTPSFSSSSKPYHSNSFQKSAESYPEYEATVSTGPSSNSLYDNKVC 392

Query: 55  PVCLSNPKDMAFGCGHQ 5
           P+CLSNPKDMAFGCGHQ
Sbjct: 393 PICLSNPKDMAFGCGHQ 409


>ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 428

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/134 (61%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
 Frame = -1

Query: 373 FDDNIPTRAFDNFQFVNFTDIMSKNVDPLKKQTEFALTALMEIPSQYKATLELNLLGRRT 194
           FDDNIP RAFDNFQFVNFT+IMSKN+D  +K+TEFAL+ALMEIPSQYKATLELN+LG R 
Sbjct: 270 FDDNIPARAFDNFQFVNFTEIMSKNMDQSRKETEFALSALMEIPSQYKATLELNILGARR 329

Query: 193 GCAPDTIPLPPPCGGNSRFRN----------QSVRDYRHNETTSPSSNSIYDNKVCPVCL 44
           G   D  PLPPP  G + F +           S    RH+ +T+P + S  DN+VCP+CL
Sbjct: 330 GKDIDRTPLPPPLYGAASFNSPKTSRQNSFRPSAPSSRHDVSTNPPATSASDNQVCPICL 389

Query: 43  SNPKDMAFGCGHQT 2
           ++PKDMAFGCGHQT
Sbjct: 390 TDPKDMAFGCGHQT 403


>ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycine max]
           gi|255644673|gb|ACU22839.1| unknown [Glycine max]
          Length = 427

 Score =  167 bits (423), Expect = 8e-40
 Identities = 84/134 (62%), Positives = 101/134 (75%), Gaps = 10/134 (7%)
 Frame = -1

Query: 373 FDDNIPTRAFDNFQFVNFTDIMSKNVDPLKKQTEFALTALMEIPSQYKATLELNLLGRRT 194
           FDDNIP RAFDNFQFVNFT+IMSKN+D  +K+TEFAL ALMEIPSQYKATLELN+LG   
Sbjct: 269 FDDNIPARAFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGACR 328

Query: 193 GCAPDTIPLPPPCGGNSRFRN-QSVRDY---------RHNETTSPSSNSIYDNKVCPVCL 44
           G   D IPLPPP  G + F + ++ R Y         RH+ +T+P + S  DN+VCP+CL
Sbjct: 329 GKDIDRIPLPPPLYGAASFNSPKTSRQYSSRPSAPSSRHDVSTNPPATSASDNQVCPICL 388

Query: 43  SNPKDMAFGCGHQT 2
           ++PKDMAFGCGHQT
Sbjct: 389 TDPKDMAFGCGHQT 402


>gb|AFK35251.1| unknown [Medicago truncatula]
          Length = 470

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/141 (60%), Positives = 103/141 (73%), Gaps = 17/141 (12%)
 Frame = -1

Query: 373 FDDNIPTRAFDNFQFVNFTDIMSKNVDPLKKQTEFALTALMEIPSQYKATLELNLLGRRT 194
           FDDNIP+RAFDNFQFVNFT IMSKNV+P +++TEFAL ALMEIPSQYKAT+EL LLG R 
Sbjct: 306 FDDNIPSRAFDNFQFVNFTKIMSKNVNPSRRETEFALDALMEIPSQYKATIELGLLGARR 365

Query: 193 GCAPDTIPLPPP--------CGGNSRFRNQSVR---------DYRHNETTSPSSNSIYDN 65
           G +PD +PLP P          GNS FR  S +         +Y  +  T PS++S++DN
Sbjct: 366 GHSPDRVPLPAPLYNRTSSSISGNS-FRANSFQQSIPRDTGYEYERSVHTEPSTSSLHDN 424

Query: 64  KVCPVCLSNPKDMAFGCGHQT 2
           KVCP+CL++ KDMAFGCGHQT
Sbjct: 425 KVCPICLTDAKDMAFGCGHQT 445


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