BLASTX nr result

ID: Atractylodes21_contig00040934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040934
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590348.1| Zinc finger MYM-type 1 [Medicago truncatula]...    60   2e-07
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    58   7e-07
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    58   7e-07
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    55   6e-06

>ref|XP_003590348.1| Zinc finger MYM-type 1 [Medicago truncatula]
           gi|355479396|gb|AES60599.1| Zinc finger MYM-type 1
           [Medicago truncatula]
          Length = 368

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -3

Query: 139 KQSRVEINLSELPADPGLRIRILDYDPNIRDKVRRAYLLKGPCQLR 2
           K+  +E++L +LP+DPGLR R+LDY P+ R+K+RR Y  KGPCQ R
Sbjct: 37  KKRWLELDLGKLPSDPGLRPRLLDYHPSDREKIRRYYFQKGPCQPR 82


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 124 EINLSELPADPGLRIRILDYDPNIRDKVRRAYLLKGPCQLR 2
           +INL+ELP+DP  R  IL Y PN RD+VRR YL++GPCQ R
Sbjct: 56  DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPR 96


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 124 EINLSELPADPGLRIRILDYDPNIRDKVRRAYLLKGPCQLR 2
           +INL+ELP+DP  R  IL Y PN RD+VRR YL++GPCQ R
Sbjct: 14  DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPR 54


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -3

Query: 145 SCKQSRVEINLSELPADPGLRIRILDYDPNIRDKVRRAYLLKGPCQ 8
           S K+S +EIN   L ADPGLR  I +Y  N RD +RRAYL KGPCQ
Sbjct: 28  SSKKSHIEINPDTLLADPGLRRPIYEYHINDRDAIRRAYLQKGPCQ 73


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -3

Query: 145 SCKQSRVEINLSELPADPGLRIRILDYDPNIRDKVRRAYLLKGPCQ 8
           S K   +E++L  LPA+PG R ++  Y PN RD++RRAYL KGPCQ
Sbjct: 31  SFKNGFLEVDLENLPANPGERKQLSCYHPNDRDEIRRAYLAKGPCQ 76


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