BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040914
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S...   115   5e-24
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   115   5e-24
ref|ZP_06597220.1| reverse transcriptase family protein, partial...   114   8e-24
gb|AAB82754.1| retrofit [Oryza longistaminata]                        112   2e-23
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  112   2e-23

>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
           gi|241942867|gb|EES16012.1| hypothetical protein
           SORBIDRAFT_08g015513 [Sorghum bicolor]
          Length = 757

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
 Frame = +1

Query: 4   KYINELLARANLSHSKPV--PSPCTTSANLSLGDSAHFDDPVKYRQLVGALQYVTLSRPD 177
           KY N++L R+ +S SKPV  P P T   +++ GD    +D  +YR LVGALQY+TL+RPD
Sbjct: 504 KYANDILVRSGMSKSKPVHTPLPSTQKISITDGDKLGEEDCTRYRSLVGALQYLTLTRPD 563

Query: 178 ITFAVNKVCQFMHSPTTNHWSAVKRILRYLLGTA 279
           I+FAVNKVCQF+H+PTT H SAVKRILRY+ GT+
Sbjct: 564 ISFAVNKVCQFLHAPTTTHLSAVKRILRYIQGTS 597


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4    KYINELLARANLSHSKPVPSPCTTSANLSL--GDSAHFDDPVKYRQLVGALQYVTLSRPD 177
            KY+N+LL R N+   KPV +P +TS  LS+  GD    +D   YR +VGALQY+TL+RPD
Sbjct: 986  KYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPD 1045

Query: 178  ITFAVNKVCQFMHSPTTNHWSAVKRILRYL 267
            I F VNKVCQF+H+PTT+HW+AVKRILRYL
Sbjct: 1046 IAFPVNKVCQFLHAPTTHHWAAVKRILRYL 1075


>ref|ZP_06597220.1| reverse transcriptase family protein, partial [Bifidobacterium
           breve DSM 20213 = JCM 1192] gi|291380553|gb|EFE88071.1|
           reverse transcriptase family protein [Bifidobacterium
           breve DSM 20213 = JCM 1192]
          Length = 153

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/93 (56%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = +1

Query: 4   KYINELLARANLSHSKPVPSPCTTSANLSL--GDSAHFDDPVKYRQLVGALQYVTLSRPD 177
           KY  +++ R N+S+SK V +P +++  LS+  GD     D   YR +VGALQY+TL+RPD
Sbjct: 55  KYARDIIKRTNMSNSKSVSTPLSSTEKLSIEAGDQLSPQDSTNYRSVVGALQYLTLTRPD 114

Query: 178 ITFAVNKVCQFMHSPTTNHWSAVKRILRYLLGT 276
           I+FAVNK+CQF+HSPTT+HWSA+KRILRY+ GT
Sbjct: 115 ISFAVNKMCQFLHSPTTSHWSALKRILRYVQGT 147


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/90 (57%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4    KYINELLARANLSHSKPVPSPCTTSANLSLGDSAHF--DDPVKYRQLVGALQYVTLSRPD 177
            KY N+LL R N+S+ KPV +P + S  L+L + +    +D ++YR +VGALQY+TL+RPD
Sbjct: 1184 KYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPD 1243

Query: 178  ITFAVNKVCQFMHSPTTNHWSAVKRILRYL 267
            I ++VNKVCQF+H+PTT+HW AVKRILRYL
Sbjct: 1244 IAYSVNKVCQFLHAPTTSHWIAVKRILRYL 1273


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/90 (57%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4    KYINELLARANLSHSKPVPSPCTTSANLSLGDSAHF--DDPVKYRQLVGALQYVTLSRPD 177
            KY N+LL R N+S+ KPV +P + S  L+L + +    +D  +YR +VGALQY+TL+RPD
Sbjct: 1175 KYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPD 1234

Query: 178  ITFAVNKVCQFMHSPTTNHWSAVKRILRYL 267
            I ++VNKVCQF+H+PTT+HW+AVKRILRYL
Sbjct: 1235 IAYSVNKVCQFLHAPTTDHWTAVKRILRYL 1264