BLASTX nr result

ID: Atractylodes21_contig00040875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040875
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]   188   1e-45
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              187   3e-45
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   178   1e-42
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   167   3e-39
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   159   9e-37

>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
          Length = 328

 Score =  188 bits (478), Expect = 1e-45
 Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 16/235 (6%)
 Frame = -3

Query: 933 HGEKPKMDLLKGRIKSELGIQCYDPANTETVSFPSTHFVKADASKTFTRSSLTPNFKFLK 754
           HGEKPKM  LKG+I+S+LGIQCY PAN +TV  PST ++KAD SKTF RSSL PNFKF+K
Sbjct: 93  HGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVK 152

Query: 753 -----------DEGTVMSPLRVHDERVTEGIIIMGKDQKVKIVHQDELLSMVGTQKTEVE 607
                       E    S L+VHDERV EGI+I+ K +K K+VHQ+ELL M+G  K +V+
Sbjct: 153 TISEDKSNLVSKETKATSXLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQ 212

Query: 606 FAYCFALPSCSL---KNIFPAIEE--VPVXXXXXXXXXXXXXXXNEIGEVGVQDCVGTLE 442
           FAYC  +   +L   K +  A+ +  V                  ++G   +QD    L+
Sbjct: 213 FAYCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHQLFAKLSTKLGG-NIQDFGQHLQ 271

Query: 441 VNSFRVSICKNDDCPHRTSSDGSTKSCEDIFFCCNWSILDEKVAWRVISAMKNMD 277
           V+S  +S+C  D CP+RT +DG  K    +FFCC WS+ D  +AW +IS M+N+D
Sbjct: 272 VDSIHISVCLKDICPYRT-TDGPQKE-SAVFFCCTWSVADVNLAWEIISIMENLD 324


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  187 bits (475), Expect = 3e-45
 Identities = 105/230 (45%), Positives = 138/230 (60%), Gaps = 11/230 (4%)
 Frame = -3

Query: 933  HGEKPKMDLLKGRIKSELGIQCYDPANTETVSFPSTHFVKADASKTFTRSSLTPNFKFLK 754
            HGEKPKM  LKG+I+S+LGIQCY PAN +TV  PST ++KAD SKTF RSSL PNFKF+K
Sbjct: 469  HGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVK 528

Query: 753  -----------DEGTVMSPLRVHDERVTEGIIIMGKDQKVKIVHQDELLSMVGTQKTEVE 607
                        E    S L+VHDERV EGI+I+ K +K K+VHQ+ELL M+G  K +V+
Sbjct: 529  TISEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQ 588

Query: 606  FAYCFALPSCSLKNIFPAIEEVPVXXXXXXXXXXXXXXXNEIGEVGVQDCVGTLEVNSFR 427
            FAYC         N+    +E                   ++G   +QD    L+V+S  
Sbjct: 589  FAYC-------CPNVVSTSDE------CSWLHLLFAKLATKLGG-NIQDFGQHLQVDSIH 634

Query: 426  VSICKNDDCPHRTSSDGSTKSCEDIFFCCNWSILDEKVAWRVISAMKNMD 277
            +S+C  D CP+RT +DG  K    +FFCC WS+ D  +AW +IS M+N+D
Sbjct: 635  ISVCLKDICPYRT-TDGPQKE-PAVFFCCTWSVADVNLAWEIISIMENLD 682


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  178 bits (452), Expect = 1e-42
 Identities = 100/227 (44%), Positives = 136/227 (59%), Gaps = 11/227 (4%)
 Frame = -3

Query: 933  HGEKPKMDLLKGRIKSELGIQCYDPANTETVSFPSTHFVKADASKTFTRSSLTPNFKFLK 754
            HGEKPKM  LK RI++EL I CY PAN + V  PST +VKA AS TF RS L PNF+FLK
Sbjct: 414  HGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRFLK 473

Query: 753  -----DEGTVM------SPLRVHDERVTEGIIIMGKDQKVKIVHQDELLSMVGTQKTEVE 607
                 +   V+      +PL+V+DERV EGI+IM K +K ++VHQD+LL M+  +K +V+
Sbjct: 474  RSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQ 533

Query: 606  FAYCFALPSCSLKNIFPAIEEVPVXXXXXXXXXXXXXXXNEIGEVGVQDCVGTLEVNSFR 427
            FAYC A    +L+      + + +               N    V ++D    L+V SF 
Sbjct: 534  FAYCCAAQLDNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHLQVESFH 593

Query: 426  VSICKNDDCPHRTSSDGSTKSCEDIFFCCNWSILDEKVAWRVISAMK 286
            VS+C  D+CP+R   D S K    ++FCC+WS  DEK+AW +ISAM+
Sbjct: 594  VSVCLKDNCPYRI-IDNSQKEAVTVYFCCSWSAADEKLAWEIISAME 639


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Cucumis sativus]
          Length = 649

 Score =  167 bits (423), Expect = 3e-39
 Identities = 95/239 (39%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
 Frame = -3

Query: 933  HGEKPKMDLLKGRIKSELGIQCYDPANTETVSFPSTHFVKADASKTFTRSSLTPNFKFLK 754
            HGEKPKM +LK RI SELGI C+DPAN ETVS  ST  VKA+AS  F +S  TPNFKFLK
Sbjct: 414  HGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLK 473

Query: 753  DE----------------GTVMSPLRVHDERVTEGIIIMGKDQKVKIVHQDELLSMVGTQ 622
                                ++ PL+V D+RV EGI++M   +K K +HQDELL ++G Q
Sbjct: 474  RNLIDPDLKDLSYKAERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQ 533

Query: 621  KTEVEFAYCFALPSCSLKNIFPAIEEVPV----XXXXXXXXXXXXXXXNEIGEVGVQDCV 454
            + EV FA+C  +        F +++E+ V                    E+ +  VQ+  
Sbjct: 534  EHEVRFAHCRPI-------YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLG 586

Query: 453  GTLEVNSFRVSICKNDDCPHRTSSDGSTKSCEDIFFCCNWSILDEKVAWRVISAMKNMD 277
              L+V S  +SIC  ++CP+RT      +S   +F CC+W + DE +AW++IS ++  D
Sbjct: 587  EYLQVESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHD 645


>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 3-II-like, partial [Cucumis
           sativus]
          Length = 472

 Score =  159 bits (402), Expect = 9e-37
 Identities = 90/223 (40%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
 Frame = -3

Query: 933 HGEKPKMDLLKGRIKSELGIQCYDPANTETVSFPSTHFVKADASKTFTRSSLTPNFKFLK 754
           HGEKPKM +LK RI SELGI C+DPAN ETVS  ST  VKA+AS  F +S  TPNF    
Sbjct: 258 HGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFNL-- 315

Query: 753 DEGTVMSPLRVHDERVTEGIIIMGKDQKVKIVHQDELLSMVGTQKTEVEFAYCFALPSCS 574
              +    L+V D+RV EGI++M   +K K +HQDELL ++G Q+ EV FA+C  +    
Sbjct: 316 ---SCGPALQVSDDRVNEGILVMENGKKXKALHQDELLLLLGQQEHEVRFAHCRPI---- 368

Query: 573 LKNIFPAIEEVPV----XXXXXXXXXXXXXXXNEIGEVGVQDCVGTLEVNSFRVSICKND 406
               F +++E+ V                    E+ +  VQ+    L+V S  +SIC  +
Sbjct: 369 ---YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKE 425

Query: 405 DCPHRTSSDGSTKSCEDIFFCCNWSILDEKVAWRVISAMKNMD 277
           +CP+RT      +S   +F CC+W + DE +AW++IS ++  D
Sbjct: 426 NCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHD 468


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