BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040874
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   115   3e-24
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   113   2e-23
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     107   1e-21
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...    96   3e-18
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    96   3e-18

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/108 (49%), Positives = 78/108 (72%)
 Frame = +2

Query: 41  PPPVQNHNLSIRTVFDGEKLEGTNFLDWYRNLRIVLKHEKKSYVLDGPVPDEPPANASKS 220
           P  V   + ++R++ + EKL GTNF DW RNLRIVL+ +KK +VL+ P+PD P  NA+ +
Sbjct: 5   PTAVPTSSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAA 64

Query: 221 IRDAWLKHVDDSIEVSCIMLATMIKDLQKDLEHLGAWEMLVQLKEMFQ 364
           I+ A+ K  D+S++VSC+MLA M  DLQK  E++ A++M+V LK MF+
Sbjct: 65  IKTAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFE 112


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/108 (48%), Positives = 77/108 (71%)
 Frame = +2

Query: 41  PPPVQNHNLSIRTVFDGEKLEGTNFLDWYRNLRIVLKHEKKSYVLDGPVPDEPPANASKS 220
           P  V   + ++R++   EKL GTNF DW RNLRIVL+ +KK +VL+ P+PD P  NA+ +
Sbjct: 88  PIAVPTSSFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPADNAAAT 147

Query: 221 IRDAWLKHVDDSIEVSCIMLATMIKDLQKDLEHLGAWEMLVQLKEMFQ 364
           ++ A+ K  D+S++VSC+MLA M  DLQK  E++ A++M+V LK MF+
Sbjct: 148 LKSAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFE 195


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/114 (46%), Positives = 75/114 (65%)
 Frame = +2

Query: 23  MAPPTNPPPVQNHNLSIRTVFDGEKLEGTNFLDWYRNLRIVLKHEKKSYVLDGPVPDEPP 202
           MA  T P        ++R++ + EKL GTNF+DWYRNLRIVLK E+K YVL+ P P+E P
Sbjct: 1   MAANTTPS-----TFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELP 55

Query: 203 ANASKSIRDAWLKHVDDSIEVSCIMLATMIKDLQKDLEHLGAWEMLVQLKEMFQ 364
            NA+ + R  + KH +D++++SC+MLATM  +LQK  E   A   +  L+ MF+
Sbjct: 56  NNATATARRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFE 109


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/101 (45%), Positives = 67/101 (66%)
 Frame = +2

Query: 62  NLSIRTVFDGEKLEGTNFLDWYRNLRIVLKHEKKSYVLDGPVPDEPPANASKSIRDAWLK 241
           + ++R++ + EKL GTNF+DWYRNLRIVL+ E K +VL  P P + P NAS + R    K
Sbjct: 8   SFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNASAAQRREHEK 67

Query: 242 HVDDSIEVSCIMLATMIKDLQKDLEHLGAWEMLVQLKEMFQ 364
             +D +++SC+MLATM  +LQ   E L A  ++  L+ MF+
Sbjct: 68  RCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFE 108


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/101 (45%), Positives = 66/101 (65%)
 Frame = +2

Query: 62  NLSIRTVFDGEKLEGTNFLDWYRNLRIVLKHEKKSYVLDGPVPDEPPANASKSIRDAWLK 241
           N ++R++ + EKL GTNF+DWYRNLRIVL+ E K +VL  P P   P NA  + R    K
Sbjct: 75  NFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHEK 134

Query: 242 HVDDSIEVSCIMLATMIKDLQKDLEHLGAWEMLVQLKEMFQ 364
             +D +++SC+MLATM  +LQ+  E L A  ++  L+ MF+
Sbjct: 135 RCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFE 175