BLASTX nr result

ID: Atractylodes21_contig00040864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040864
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516241.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_003542370.1| PREDICTED: uncharacterized protein LOC100499...    59   3e-07
gb|ACU13810.1| unknown [Glycine max]                                   59   3e-07
ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264...    57   2e-06
gb|ABR13284.1| unknown protein [Prunus dulcis]                         57   2e-06

>ref|XP_002516241.1| conserved hypothetical protein [Ricinus communis]
           gi|223544727|gb|EEF46243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = -2

Query: 235 MTDNKRRPVIGKL----ITPGLRSGFLEVGT--SPTTPLEFKVLSPRGMIHCDMGGVGLG 74
           M   +  P+IG+L    ++    +GFL+V T  SP +PL++++ SPRG+ + D+GGVGLG
Sbjct: 1   MLGKRTNPMIGRLSELLVSGNRAAGFLDVATAPSPRSPLDYRIQSPRGLKNYDLGGVGLG 60

Query: 73  IVAALQKS 50
           IVAAL+KS
Sbjct: 61  IVAALEKS 68


>ref|XP_003542370.1| PREDICTED: uncharacterized protein LOC100499825 [Glycine max]
          Length = 279

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = -2

Query: 235 MTDNKRRPVIGKL----ITPGLRSGFLEVGTSPTTPLEFKVL-SPRGMIHCDMGGVGLGI 71
           M+  + RP+IGKL    ++ G     L+   SP  PL+ K++ SPRG+ + D+GGVGLGI
Sbjct: 1   MSGKRPRPMIGKLSELLVSRGRTVALLDTTGSPRGPLDMKMMQSPRGLKNYDLGGVGLGI 60

Query: 70  VAALQKSGDNIPAKGSVP 17
           V AL KS + + A+  +P
Sbjct: 61  VVALDKSNNEVAAREVLP 78


>gb|ACU13810.1| unknown [Glycine max]
          Length = 250

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = -2

Query: 235 MTDNKRRPVIGKL----ITPGLRSGFLEVGTSPTTPLEFKVL-SPRGMIHCDMGGVGLGI 71
           M+  + RP+IGKL    ++ G     L+   SP  PL+ K++ SPRG+ + D+GGVGLGI
Sbjct: 1   MSGKRPRPMIGKLSELLVSRGRTVALLDTTGSPRGPLDMKMMQSPRGLKNYDLGGVGLGI 60

Query: 70  VAALQKSGDNIPAKGSVP 17
           V AL KS + + A+  +P
Sbjct: 61  VVALDKSNNEVAAREVLP 78


>ref|XP_002276822.1| PREDICTED: uncharacterized protein LOC100264520 [Vitis vinifera]
           gi|297738529|emb|CBI27774.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 18/92 (19%)
 Frame = -2

Query: 235 MTDNKRRPVIGKL---ITPGLRSGFLEVGTSPTTPLEFKVLSPRGMIHCDM-GGVGLGIV 68
           M     RP IGKL   +  G  +  L+V TSP +PL+ K+ SPRG  + D+  GVGLGIV
Sbjct: 1   MLGKTSRPAIGKLAGSLISGNCTAILDVATSPRSPLDMKIQSPRGQKNYDLFSGVGLGIV 60

Query: 67  AALQK--------------SGDNIPAKGSVPI 14
           AAL K              SG N+   G VP+
Sbjct: 61  AALDKSSNCRGEILAKYAVSGTNMGRSGPVPV 92


>gb|ABR13284.1| unknown protein [Prunus dulcis]
          Length = 196

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
 Frame = -2

Query: 214 PVIGKL---ITPGLRSGFL-EVGT-SPTTPLEFKVLS--PRGMIHCDMGGVGLGIVAALQ 56
           P+IGKL   +  G R+GF  ++GT SP +PL+ K+ S  PRG+ + D+GGVGLGIVAAL+
Sbjct: 14  PMIGKLSELLVSGNRAGFFFDMGTTSPRSPLDLKMQSSSPRGLKNYDLGGVGLGIVAALE 73

Query: 55  KSGDN 41
           KS  N
Sbjct: 74  KSSHN 78


Top