BLASTX nr result

ID: Atractylodes21_contig00040859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040859
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   110   9e-23
ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like...   108   4e-22
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   108   4e-22
emb|CBI36629.3| unnamed protein product [Vitis vinifera]              107   1e-21

>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/89 (61%), Positives = 65/89 (73%)
 Frame = +1

Query: 142 VKLGKFKNXXXXXXXXXXXXXXKSKIDARRCFSMGSFEYVMDDNSSLQVPIRTQVKKQAY 321
           VKLGKF+N               S +D RRCFSMGSFEYVMDDN+SLQV IRT +KKQ+ 
Sbjct: 270 VKLGKFRNVDIGEGSS------NSNVDERRCFSMGSFEYVMDDNTSLQVAIRTPMKKQSS 323

Query: 322 KKSSLPITPGHRPAMSECGGDSRRDFKGI 408
           KK S+P+TPGHRPAMSEC  +SRR+F G+
Sbjct: 324 KKPSIPLTPGHRPAMSECDCESRREFNGL 352


>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
 Frame = +1

Query: 142 VKLGKFKNXXXXXXXXXXXXXXKSKIDARRCFSMGSFEYVMDDNSSLQVPIRTQVKKQAY 321
           VKLGKF+N                 +D+RRC+SMGSFEYV+D+NSSLQVP+RT +KKQ+ 
Sbjct: 270 VKLGKFRNVDNGEGSSTI------NVDSRRCYSMGSFEYVLDENSSLQVPVRTPMKKQSS 323

Query: 322 KKSSLPITPGHRPAMSECGGDSRRDFKGIEAYTXXXXXXXXXXXA--------MRRESFS 477
           KK +LP+TPGHRPAMSEC  +SRR+F G E+             +         +RESFS
Sbjct: 324 KKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGIGRSKRESFS 383

Query: 478 VS 483
           +S
Sbjct: 384 IS 385


>ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
          Length = 522

 Score =  108 bits (270), Expect = 4e-22
 Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
 Frame = +1

Query: 139 TVKLGKFKNXXXXXXXXXXXXXXKS--KIDARRCFSMGSFEYVMDDNSSLQVPIRTQVKK 312
           TVKLGKF++               S   +DARRCFSMGSF YVMD++SSLQVPIRT +KK
Sbjct: 263 TVKLGKFRSVDGGGEGGEGSSSSTSTNNVDARRCFSMGSFAYVMDESSSLQVPIRTPIKK 322

Query: 313 Q-AYKKSSLPITPGHRPAMSECGGDSRRDFK--GIEAYT 420
           Q + KKS LP+TPGHRPAMSEC  +SRRDFK  G +A T
Sbjct: 323 QSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAGFDATT 361


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score =  108 bits (270), Expect = 4e-22
 Identities = 61/100 (61%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
 Frame = +1

Query: 139 TVKLGKFKNXXXXXXXXXXXXXXKSKI---DARRCFSMGSFEYVMDDNSSLQVPIRTQVK 309
           TVKLGKF++               S I   DARRCFSMGSF YVMD++SSLQVPIRT +K
Sbjct: 269 TVKLGKFRSVDGGGGGGDGGGEGTSSINNVDARRCFSMGSFAYVMDESSSLQVPIRTPIK 328

Query: 310 KQ-AYKKSSLPITPGHRPAMSECGGDSRRDFK--GIEAYT 420
           KQ + KKS LP+TPGHRPAMSEC  +SRRDFK  G +A T
Sbjct: 329 KQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAGFDATT 368


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/91 (61%), Positives = 64/91 (70%)
 Frame = +1

Query: 142 VKLGKFKNXXXXXXXXXXXXXXKSKIDARRCFSMGSFEYVMDDNSSLQVPIRTQVKKQAY 321
           VKLGKFKN               S +D RRCFSMGSFEYVMD+NSSLQVPIRT VKK + 
Sbjct: 278 VKLGKFKNVDGGGEGSST-----SNVDERRCFSMGSFEYVMDENSSLQVPIRTPVKKTST 332

Query: 322 KKSSLPITPGHRPAMSECGGDSRRDFKGIEA 414
           K+ SLP+TPG R AMSEC  +SRR+F G +A
Sbjct: 333 KRRSLPLTPGGRMAMSECDCESRREFSGFDA 363


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