BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040845
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   109   2e-30
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   109   5e-30
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   107   1e-29
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]               106   1e-28
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   105   5e-28

>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  109 bits (273), Expect(2) = 2e-30
 Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = -1

Query: 271 YPSVCNMVETQFGKKVKGIRSDNARELDLIAFFNAKGIMAQKSCVELPEQNVVIERKHQL 92
           +P    MVETQ+  KVK +RSDNA EL     +  KGI+A  SC E PEQN V+ERKHQ 
Sbjct: 638 FPDFITMVETQYDTKVKAVRSDNAPELKFEELYRRKGIVAYHSCPETPEQNSVVERKHQH 697

Query: 91  LLNVARG-FFQSKIPLVYWSECVLTAIFLIN 2
           +LNVAR   FQS+IPL YW +C+LTA+F+IN
Sbjct: 698 ILNVARALLFQSQIPLSYWGDCILTAVFIIN 728



 Score = 47.8 bits (112), Expect(2) = 2e-30
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = -2

Query: 339 VVDDHSRFTWIYMLKHKSDVITIIPQF 259
           +VDDH+R TW+Y++K+KSDV+TI P F
Sbjct: 615 IVDDHTRVTWVYLMKYKSDVLTIFPDF 641


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  109 bits (273), Expect(2) = 5e-30
 Identities = 51/90 (56%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = -1

Query: 268 PSVCNMVETQFGKKVKGIRSDNARELDLIAFFNAKGIMAQKSCVELPEQNVVIERKHQLL 89
           P+   MVE QF   +KG+RSDNA EL+   F+++KGI+   SC E P+QN V+ERKHQ +
Sbjct: 512 PTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHI 571

Query: 88  LNVARG-FFQSKIPLVYWSECVLTAIFLIN 2
           LNVAR  FFQS IP+ YW +C+LTA++LIN
Sbjct: 572 LNVARSLFFQSHIPISYWGDCILTAVYLIN 601



 Score = 46.2 bits (108), Expect(2) = 5e-30
 Identities = 17/27 (62%), Positives = 25/27 (92%)
 Frame = -2

Query: 339 VVDDHSRFTWIYMLKHKSDVITIIPQF 259
           +VDD+SR TW+Y+L++KSDV+T+IP F
Sbjct: 488 IVDDYSRATWVYLLRNKSDVLTVIPTF 514


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  107 bits (266), Expect(2) = 1e-29
 Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 271 YPSVCNMVETQFGKKVKGIRSDNARELDLIAFFNAKGIMAQKSCVELPEQNVVIERKHQL 92
           +P+  ++VE Q+  +VK +RSDNA+EL    F+ AKGI++  SC E PEQN V+ERKHQ 
Sbjct: 673 FPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPEQNSVVERKHQH 732

Query: 91  LLNVARG-FFQSKIPLVYWSECVLTAIFLIN 2
           +LNVAR   FQS + L YW +CVLTA+FLIN
Sbjct: 733 ILNVARALMFQSNMSLPYWGDCVLTAVFLIN 763



 Score = 47.8 bits (112), Expect(2) = 1e-29
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -2

Query: 339 VVDDHSRFTWIYMLKHKSDVITIIPQF 259
           +VDDHSR TWIY+LK KSDV+T+ P F
Sbjct: 650 IVDDHSRATWIYLLKSKSDVLTVFPAF 676


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score =  106 bits (264), Expect(2) = 1e-28
 Identities = 55/91 (60%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -1

Query: 271 YPSVCNMVETQFGKKVKGIRSDNARELDLIAFFNAKGIMAQKSCVELPEQNVVIERKHQL 92
           +PS   MVETQ+  KV  +RSDNA EL     F  +GI A   C E PEQN V+ERKHQ 
Sbjct: 663 FPSFLKMVETQYHTKVCSVRSDNAHELKFNELFAKEGIKADHPCPETPEQNFVVERKHQH 722

Query: 91  LLNVARG-FFQSKIPLVYWSECVLTAIFLIN 2
           LLNVAR   FQS IPL YW +CVLTA+FLIN
Sbjct: 723 LLNVARALMFQSGIPLEYWGDCVLTAVFLIN 753



 Score = 45.1 bits (105), Expect(2) = 1e-28
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -2

Query: 339 VVDDHSRFTWIYMLKHKSDVITIIPQF 259
           +VDD SR TWIY+LK KSDV+T+ P F
Sbjct: 640 IVDDFSRATWIYLLKQKSDVLTVFPSF 666


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  105 bits (262), Expect(2) = 5e-28
 Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -1

Query: 277 YYYPSVCNMVETQFGKKVKGIRSDNARELDLIAFFNAKGIMAQKSCVELPEQNVVIERKH 98
           + +P+  N +ETQ+  K+K +R DNA EL     F  KGI++  SC E  EQN V+ERKH
Sbjct: 620 HIFPTFVNQIETQYNTKIKSVRRDNAPELSFTELFKEKGIVSYHSCPETLEQNSVLERKH 679

Query: 97  QLLLNVARG-FFQSKIPLVYWSECVLTAIFLIN 2
           Q LLNVAR   FQS++PL YW +CVLTA FLIN
Sbjct: 680 QHLLNVARALMFQSQVPLQYWGDCVLTAAFLIN 712



 Score = 43.9 bits (102), Expect(2) = 5e-28
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -2

Query: 339 VVDDHSRFTWIYMLKHKSDVITIIPQF 259
           +VDDHSR TWIY+L+ KSDV+ I P F
Sbjct: 599 IVDDHSRATWIYLLQSKSDVLHIFPTF 625