BLASTX nr result

ID: Atractylodes21_contig00040835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040835
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16742.3| unnamed protein product [Vitis vinifera]              171   6e-41
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   171   6e-41
ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,...   162   3e-38
dbj|BAJ92663.1| predicted protein [Hordeum vulgare subsp. vulgare]    125   4e-27

>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/137 (59%), Positives = 105/137 (76%)
 Frame = -1

Query: 412 PKGEAFKHLILLLQCCIRPNECTVTSVLTSCEDCLGLSQTHALAIRLGLGHDISLTNALI 233
           P GEA KHLIL+L+ CIRPNE T+T +LTSC   L L Q HALAI +G   + SL+NALI
Sbjct: 363 PDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALI 422

Query: 232 TMYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMMRLGFKPDEI 53
           TMY+R GD+ S+++AF++ + KD+VSWTAM+LA++ HG G HA+  F  M++ G KPDEI
Sbjct: 423 TMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEI 482

Query: 52  TFVAVLTACSHTGLVSK 2
           TFV VL+ACSH GLV K
Sbjct: 483 TFVGVLSACSHAGLVKK 499


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/137 (59%), Positives = 105/137 (76%)
 Frame = -1

Query: 412 PKGEAFKHLILLLQCCIRPNECTVTSVLTSCEDCLGLSQTHALAIRLGLGHDISLTNALI 233
           P GEA KHLIL+L+ CIRPNE T+T +LTSC   L L Q HALAI +G   + SL+NALI
Sbjct: 269 PDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALI 328

Query: 232 TMYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMMRLGFKPDEI 53
           TMY+R GD+ S+++AF++ + KD+VSWTAM+LA++ HG G HA+  F  M++ G KPDEI
Sbjct: 329 TMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEI 388

Query: 52  TFVAVLTACSHTGLVSK 2
           TFV VL+ACSH GLV K
Sbjct: 389 TFVGVLSACSHAGLVKK 405


>ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09410-like [Glycine max]
          Length = 669

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/133 (57%), Positives = 101/133 (75%)
 Frame = -1

Query: 406 GEAFKHLILLLQCCIRPNECTVTSVLTSCEDCLGLSQTHALAIRLGLGHDISLTNALITM 227
           GEA    +L+L+ C RPNE T+TSV+TSC+  + L Q HA+ I LG  H+  LTNALIT+
Sbjct: 361 GEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTNALITL 420

Query: 226 YARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMMRLGFKPDEITF 47
           Y++ GDL SA+L F+  ++KD+VSWTAM++AYS HG G HA++ FARM+  G KPDE+TF
Sbjct: 421 YSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTF 480

Query: 46  VAVLTACSHTGLV 8
           V +L+ACSH GLV
Sbjct: 481 VGLLSACSHVGLV 493


>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 656

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/137 (56%), Positives = 98/137 (71%)
 Frame = -1

Query: 412 PKGEAFKHLILLLQCCIRPNECTVTSVLTSCEDCLGLSQTHALAIRLGLGHDISLTNALI 233
           P+  + ++LIL+L+   +PNE T+TSVLT+C+  L L Q H L I LG   D  L N L+
Sbjct: 345 PESNSLRYLILMLRSNFKPNETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLV 404

Query: 232 TMYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMMRLGFKPDEI 53
           T Y+RCGD+ SA+  FD  E KDIVSWTAM+LAYS HG G HA++ FARM+R G KPD I
Sbjct: 405 TTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGI 464

Query: 52  TFVAVLTACSHTGLVSK 2
           TFV +L+ACSH GLV K
Sbjct: 465 TFVGLLSACSHAGLVKK 481



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = -1

Query: 259 DISLTNALITMYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMM 80
           DI+  NA+IT Y   G +  A   F+    K+IVSW A++  Y+ +G  ++++     M+
Sbjct: 298 DIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILML 357

Query: 79  RLGFKPDEITFVAVLTAC 26
           R  FKP+E T  +VLTAC
Sbjct: 358 RSNFKPNETTITSVLTAC 375


>dbj|BAJ92663.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 547

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/136 (44%), Positives = 88/136 (64%)
 Frame = -1

Query: 409 KGEAFKHLILLLQCCIRPNECTVTSVLTSCEDCLGLSQTHALAIRLGLGHDISLTNALIT 230
           KGE     +L+L+  + P+  T+ SVL + E  + + Q H LA   GL  D SL NAL+T
Sbjct: 356 KGEVMGLFLLMLRSAVSPDRTTLISVLVTSESTVEVGQIHGLATTRGLLSDTSLGNALLT 415

Query: 229 MYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMMRLGFKPDEIT 50
           MY+R GDL SA   F   + KD ++WT+MM A++ HG  ++A++ FA+M++ G+KP   T
Sbjct: 416 MYSRSGDLHSAWQVFKMIQEKDPITWTSMMRAFANHGRASYALQAFAQMLQHGYKPSSTT 475

Query: 49  FVAVLTACSHTGLVSK 2
           F+A L+ACSH GLV K
Sbjct: 476 FIAALSACSHAGLVDK 491



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/81 (34%), Positives = 41/81 (50%)
 Frame = -1

Query: 259 DISLTNALITMYARCGDLGSAQLAFDTFETKDIVSWTAMMLAYSTHGFGAHAIENFARMM 80
           D +  NA+IT YA  G +  AQ  FD+   KD+VSW A++  Y+ +      +  F  M+
Sbjct: 308 DTAAWNAMITAYANDGQMNEAQRLFDSIPAKDLVSWNAIIHGYAKNKHKGEVMGLFLLML 367

Query: 79  RLGFKPDEITFVAVLTACSHT 17
           R    PD  T ++VL     T
Sbjct: 368 RSAVSPDRTTLISVLVTSEST 388


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