BLASTX nr result

ID: Atractylodes21_contig00040794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040794
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medic...    65   6e-09
ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medic...    65   6e-09
ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora ...    64   2e-08
ref|XP_003190667.1| zinc knuckle nucleic acid binding protein [A...    62   4e-08
ref|XP_002380695.1| zinc knuckle nucleic acid binding protein, p...    62   4e-08

>ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355503840|gb|AES85043.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 358

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
 Frame = -3

Query: 345 KTSGSEKAKGSYMGYPPCEKCGKKHMGECRLGSSLR----YTCGKPGHTCKDCKEERQCY 178
           K  G ++ +G   G P  +  GKK         SL     + CG  GH   DCK +  C+
Sbjct: 14  KAQGEKRGRGHGAGKPYSKDKGKKREAGGGSKPSLADVKCFKCGSMGHYASDCKNDFTCH 73

Query: 177 ECGQSGHVRADCPKL----------QKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDV 28
           +CG++GH  ADC  +          +KG  STK T  K  +A G+ F + AEE ++  ++
Sbjct: 74  KCGKAGHKAADCRGVAREITCYNCGEKGHISTKCT--KPKKAAGKVFALNAEEVEQPDNL 131

Query: 27  ASGTFLIN 4
             G   IN
Sbjct: 132 IRGMCFIN 139


>ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355477410|gb|AES58613.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 424

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
 Frame = -3

Query: 345 KTSGSEKAKGSYMGYPPCEKCGKKHMGECRLGSSLR----YTCGKPGHTCKDCKEERQCY 178
           K  G ++ +G   G P  +  GKK         SL     + CG  GH   DCK +  C+
Sbjct: 76  KAQGEKRGRGHGAGKPYSKDKGKKREAGGGSKPSLADVKCFKCGSMGHYASDCKNDFTCH 135

Query: 177 ECGQSGHVRADCPKL----------QKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDV 28
           +CG++GH  ADC  +          +KG  STK T  K  +A G+ F + AEE ++  ++
Sbjct: 136 KCGKAGHKAADCRGVAREITCYNCGEKGHISTKCT--KPKKAAGKVFALNAEEVEQPDNL 193

Query: 27  ASGTFLIN 4
             G   IN
Sbjct: 194 IRGMCFIN 201


>ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
           gi|238849795|gb|EEQ39259.1| hypothetical protein
           CLUG_03387 [Clavispora lusitaniae ATCC 42720]
          Length = 171

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
 Frame = -3

Query: 363 KGNKQAKTSGSEKAKGSYMGYPPCEKCG-KKHMG-ECRLGSSLRYTCGKPGHTCKDC--- 199
           K    A  + + K  G +   P C KCG   H   +C+ GS   Y+CGK GH  K+C   
Sbjct: 87  KNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAKDCQAGSVKCYSCGKSGHISKECTLA 146

Query: 198 --KEERQCYECGQSGHVRADC 142
             K  + CY CGQ+GH+  DC
Sbjct: 147 SDKVTKSCYNCGQTGHIAKDC 167


>ref|XP_003190667.1| zinc knuckle nucleic acid binding protein [Aspergillus oryzae
           RIB40]
          Length = 237

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/117 (35%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
 Frame = -3

Query: 321 KGSYMGYP---PCEKCG-KKHMG-ECRLGSSLRYTCGKPGHTCKDCKEE---------RQ 184
           +G Y GYP    C KCG   H   +C+  +   Y CGK GH  +DC            + 
Sbjct: 113 RGGYGGYPRAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKV 172

Query: 183 CYECGQSGHVRADCPK----LQKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDVA 25
           CY+C Q+GH+  DCP      Q+   ST      AP A G A    AE + E   VA
Sbjct: 173 CYKCAQAGHISRDCPNNEAATQQPAESTTAATPAAP-ATGAAAAAAAETSTEAAPVA 228



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
 Frame = -3

Query: 294 CEKCGK-KHMGE-CRLGSSLRYTCGKPGHTCKDCK-----EERQCYECGQSGHVRADCPK 136
           C KCG   H  E C     L Y C +PGH    C      E +QCY C   GHV+ADCP 
Sbjct: 8   CYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPT 67

Query: 135 LQKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDVASGTF 13
           L+  G++ +  +   P    R     A  A   V    G +
Sbjct: 68  LRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGY 108


>ref|XP_002380695.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
           flavus NRRL3357] gi|220693969|gb|EED50314.1| zinc
           knuckle nucleic acid binding protein, putative
           [Aspergillus flavus NRRL3357]
          Length = 238

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
 Frame = -3

Query: 321 KGSYMGYP---PCEKCG-KKHMG-ECRLGSSLRYTCGKPGHTCKDCKEE---------RQ 184
           +G Y GYP    C KCG   H   +C+  +   Y CGK GH  +DC            + 
Sbjct: 113 RGGYGGYPRAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKV 172

Query: 183 CYECGQSGHVRADCPK----LQKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDVA 25
           CY+C Q+GH+  DCP      Q+   ST      AP     A    AE + E   VA
Sbjct: 173 CYKCAQAGHISRDCPNNEAATQQPAESTTAATPAAPATGAAAAAAAAETSTEAAPVA 229



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
 Frame = -3

Query: 294 CEKCGK-KHMGE-CRLGSSLRYTCGKPGHTCKDCK-----EERQCYECGQSGHVRADCPK 136
           C KCG   H  E C     L Y C +PGH    C      E +QCY C   GHV+ADCP 
Sbjct: 8   CYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPT 67

Query: 135 LQKGGSSTKKTDDKAPRAKGRAFTMTAEEAKETVDVASGTF 13
           L+  G++ +  +   P    R     A  A   V    G +
Sbjct: 68  LRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGY 108


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