BLASTX nr result

ID: Atractylodes21_contig00040747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040747
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    72   4e-11
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    64   1e-08
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    61   8e-08
ref|XP_002334469.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002334468.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548234|gb|EEF49725.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
 Frame = +2

Query: 2   ESPKFPGKRSRLWNHEDCFNVLKEHAGTTKVEGFMFDMQKMKEPKSTSVLKMDNVKKRSF 181
           ESP+ PG RSRLW+HED   VL+E+ GT  + G   D+Q + + +  S+  ++  K++ +
Sbjct: 499 ESPEHPGSRSRLWHHEDTLTVLRENIGTEAIRGLTLDLQIIMQEQQHSISCINCAKRQHY 558

Query: 182 EEYLGNTMH-----------------------GNESKFKIGALEKMQNIMLLQLNYVTFS 292
           E+ +                             NE  F+  A  KM+ + LLQLNYV   
Sbjct: 559 EDLISKYREKRSRLGFFSWQPAEVGLIPPFPMSNEVVFETKAFAKMRQLKLLQLNYVKLD 618

Query: 293 GXXXXXXXXXXXXSWQGF 346
           G             W GF
Sbjct: 619 GRYEHFPRNLIWLCWHGF 636


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223543328|gb|EEF44860.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 1186

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
 Frame = +2

Query: 2   ESPKFPGKRSRLWNHEDCFNVLKEHAGTTKVEGFMFDMQKMKEPKSTSVLKMDNVKKRSF 181
           ESP  PGKRSRLW+ +D   VL+++ GT  ++G +  +    E K T      +  K + 
Sbjct: 509 ESPDDPGKRSRLWDPKDATKVLRQNTGTESIKGLILKLPTQTENKRTRKDATADHTKENG 568

Query: 182 EEYLGNTMHGNES-----------KFKIGALEKMQNIMLLQLNYVTFSGXXXXXXXXXXX 328
           EE L + +   +S            F   A EKM  + LL LNYV  S            
Sbjct: 569 EEDLSDDLLDQKSYSKKPNTSPTNSFSTKAFEKMVRLKLLNLNYVELSEGYKKFPKGLVW 628

Query: 329 XSWQGFS 349
             W+GFS
Sbjct: 629 LCWRGFS 635


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223541425|gb|EEF42975.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/115 (32%), Positives = 54/115 (46%)
 Frame = +2

Query: 2   ESPKFPGKRSRLWNHEDCFNVLKEHAGTTKVEGFMFDMQKMKEPKSTSVLKMDNVKKRSF 181
           ESP+ PGKRSR+W  +D FN+L+E+ GT  V+G   D+Q +KE  +       ++K ++F
Sbjct: 511 ESPEDPGKRSRVWRDKDAFNLLRENTGTETVKGLTLDLQMLKEANT-------DLKTKAF 563

Query: 182 EEYLGNTMHGNESKFKIGALEKMQNIMLLQLNYVTFSGXXXXXXXXXXXXSWQGF 346
            E                    M  + LL+LN V  SG             W+GF
Sbjct: 564 GE--------------------MNKLKLLRLNCVKLSGDCEDFPKGLVWLFWRGF 598


>ref|XP_002334469.1| predicted protein [Populus trichocarpa] gi|222872415|gb|EEF09546.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/131 (32%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
 Frame = +2

Query: 2   ESPKFPGKRSRLWNHEDCFNVLKEHAGTTKVEGFMFDMQKMKEPKSTSVLKMDNVKKRS- 178
           ESPK      R+W HED F VLK  +   K+ G   DM  + E     VL   ++  R  
Sbjct: 244 ESPKC----QRIWRHEDAFTVLKGTSDAEKLRGLTLDMHALMEDDYAEVLCTSSIVHRKL 299

Query: 179 -----FEEYL------GNTMHGNESKFKI---GALEKMQNIMLLQLNYVTFSGXXXXXXX 316
                F+++L      G    G  S F I    A  KM N+  LQLNY  F G       
Sbjct: 300 VRLNFFQQWLSDFSDGGKLQTGQTSLFPILSTDAFRKMPNVKFLQLNYTKFYGSFEHFPK 359

Query: 317 XXXXXSWQGFS 349
                 W GFS
Sbjct: 360 NLIWLCWHGFS 370


>ref|XP_002334468.1| predicted protein [Populus trichocarpa] gi|222872414|gb|EEF09545.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/131 (32%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
 Frame = +2

Query: 2   ESPKFPGKRSRLWNHEDCFNVLKEHAGTTKVEGFMFDMQKMKEPKSTSVLKMDNVKKRS- 178
           ESPK      R+W HED F VLK  +   K+ G   DM  + E     VL   ++  R  
Sbjct: 177 ESPKC----QRIWRHEDAFTVLKGTSDAEKLRGLTLDMHALMEDDYAEVLCTSSIVHRKL 232

Query: 179 -----FEEYL------GNTMHGNESKFKI---GALEKMQNIMLLQLNYVTFSGXXXXXXX 316
                F+++L      G    G  S F I    A  KM N+  LQLNY  F G       
Sbjct: 233 VRLNFFQQWLSDFSDRGKLQTGQTSLFPILSTDAFRKMPNVKFLQLNYTKFYGSFEHFPK 292

Query: 317 XXXXXSWQGFS 349
                 W GFS
Sbjct: 293 NLIWLCWHGFS 303


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