BLASTX nr result

ID: Atractylodes21_contig00040735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040735
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
emb|CBI27690.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...    80   2e-13
ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago t...    77   1e-12
ref|NP_001242840.1| uncharacterized protein LOC100805618 [Glycin...    74   9e-12

>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +3

Query: 24  MEQGE---GSGSKRSDEIWSKLVPSDSRYSDVELWSDEVEIHSEVNVSSFEKQGWCKITR 194
           ME GE   GS S  S+E W+KLVPSDSRYSDVE+ S+E+ I SE+  +S EK  WCKITR
Sbjct: 1   MEFGECSSGSNSSSSNEAWAKLVPSDSRYSDVEIRSNEMVICSEITSTSLEKHEWCKITR 60

Query: 195 NSDLSSA 215
           NSD SSA
Sbjct: 61  NSDQSSA 67


>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24  MEQGEGSGSKRSDEI-WSKLVPSDSRYSDVELWSDEVEIHSEVNVSSFEKQGWCKITRNS 200
           ME GE S +  S EI W+KLVPSDSRYS+VEL  DE+ I S+V   SF+KQ WCK+TRNS
Sbjct: 689 MEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNS 748

Query: 201 DLSSAT 218
           D  SAT
Sbjct: 749 DQCSAT 754


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24  MEQGEGSGSKRSDEI-WSKLVPSDSRYSDVELWSDEVEIHSEVNVSSFEKQGWCKITRNS 200
           ME GE S +  S EI W+KLVPSDSRYS+VEL  DE+ I S+V   SF+KQ WCK+TRNS
Sbjct: 1   MEFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNS 60

Query: 201 DLSSAT 218
           D  SAT
Sbjct: 61  DQCSAT 66


>ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago truncatula]
           gi|355524447|gb|AET04901.1| E3 ubiquitin-protein ligase
           CHFR [Medicago truncatula]
          Length = 471

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +3

Query: 42  SGSKRSDEIWSKLVPSDSRYSDVELWSDEVEIHSEVNVSSFEKQGWCKITRNSDLSSAT 218
           + +K SDEIW+KLV SDSRY DVE+ SD+ +I SE++ +S +K  WCKI RNSDL SAT
Sbjct: 16  ASAKPSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSAT 74


>ref|NP_001242840.1| uncharacterized protein LOC100805618 [Glycine max]
           gi|255645319|gb|ACU23156.1| unknown [Glycine max]
          Length = 466

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = +3

Query: 9   KSKGSMEQGEGSGSKRSDEIWSKLVPSDSRYSDVELWSDEVEIHSEVNVSSFEKQGWCKI 188
           + +G       + +  SDEIW+KLV SD RYSDV++ SDE  I SE++ +S +K  WCKI
Sbjct: 2   EERGECSASASASANPSDEIWAKLVLSDERYSDVQISSDEKVISSEISATSNDKHSWCKI 61

Query: 189 TRNSDLSSAT 218
            RN DL SAT
Sbjct: 62  VRNPDLCSAT 71


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