BLASTX nr result

ID: Atractylodes21_contig00040695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040695
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    71   3e-10
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
emb|CBI34098.3| unnamed protein product [Vitis vinifera]               70   6e-10
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    69   1e-09

>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
            predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = -3

Query: 863  RDIYERLVDGLCQKGKFSEAVASIDEIGKRGIMLSFATCSTLVHSLHSAGYKNKLAGVLK 684
            +++   L+D LC+K   SE +  +++I ++G+ LS ATCSTLV   H AG  +  A VLK
Sbjct: 935  KNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLK 994

Query: 683  SMESFGWVPQASNLTDLINQHEPDADWEKDGINLPKQVA 567
            SM  F WVP ++ L DLIN  +   D E  G +  KQ+A
Sbjct: 995  SMVRFKWVPDSTELNDLINVEQDSTDSENAG-DFLKQMA 1032


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 37/96 (38%), Positives = 57/96 (59%)
 Frame = -3

Query: 854  YERLVDGLCQKGKFSEAVASIDEIGKRGIMLSFATCSTLVHSLHSAGYKNKLAGVLKSME 675
            Y+ L+  LC+K +F E +  ++EIG+ G  L   TCS +      AG  ++ A VL+SM 
Sbjct: 917  YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976

Query: 674  SFGWVPQASNLTDLINQHEPDADWEKDGINLPKQVA 567
             FGWV   ++L DL++ ++  A+ E D  NL KQ+A
Sbjct: 977  KFGWVSNTTSLGDLVDGNQNGANSE-DSDNLLKQMA 1011


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 38/96 (39%), Positives = 57/96 (59%)
 Frame = -3

Query: 857  IYERLVDGLCQKGKFSEAVASIDEIGKRGIMLSFATCSTLVHSLHSAGYKNKLAGVLKSM 678
            I++ L+  LC++   +EA   +DE+G+ G+  S A CSTLV S H AG  ++   V + +
Sbjct: 840  IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV 899

Query: 677  ESFGWVPQASNLTDLINQHEPDADWEKDGINLPKQV 570
            +S G VP  + L DL+N +  D D E D  NL KQ+
Sbjct: 900  KSLGLVPDTTTLIDLVNGNLNDTDSE-DARNLIKQL 934


>emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 38/96 (39%), Positives = 57/96 (59%)
 Frame = -3

Query: 857 IYERLVDGLCQKGKFSEAVASIDEIGKRGIMLSFATCSTLVHSLHSAGYKNKLAGVLKSM 678
           I++ L+  LC++   +EA   +DE+G+ G+  S A CSTLV S H AG  ++   V + +
Sbjct: 623 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV 682

Query: 677 ESFGWVPQASNLTDLINQHEPDADWEKDGINLPKQV 570
           +S G VP  + L DL+N +  D D E D  NL KQ+
Sbjct: 683 KSLGLVPDTTTLIDLVNGNLNDTDSE-DARNLIKQL 717


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 37/96 (38%), Positives = 57/96 (59%)
 Frame = -3

Query: 857  IYERLVDGLCQKGKFSEAVASIDEIGKRGIMLSFATCSTLVHSLHSAGYKNKLAGVLKSM 678
            I++ L+  LC++   +EA   +DE+G+ G+  S A C+TLV S H AG  ++   V + +
Sbjct: 929  IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGV 988

Query: 677  ESFGWVPQASNLTDLINQHEPDADWEKDGINLPKQV 570
            +S G VP  + L DL+N +  D D E D  NL KQ+
Sbjct: 989  KSLGLVPDTTTLIDLVNGNLNDTDSE-DARNLIKQL 1023


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