BLASTX nr result

ID: Atractylodes21_contig00040682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040682
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    91   1e-16
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    89   3e-16
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    87   1e-15
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    61   1e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/91 (45%), Positives = 63/91 (69%)
 Frame = +3

Query: 6    ILQRFSGLEIQNPYEQISTINQVGSILDYIDDFEYLLSLVPRLPESQSLGYFIVGLRPDV 185
            ++ R+ G  ++NP+E++ST+ Q+GS+ ++++ FE L S V RLPE Q LGYF+ GL+  +
Sbjct: 813  LIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHI 872

Query: 186  KRWVHLHRPTTRLQAMYLDKDVEAMLHPSDD 278
            +R V    PTTR+Q M + KDVE  L+  DD
Sbjct: 873  RRRVRTLNPTTRMQMMRIAKDVEDELNEEDD 903


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +3

Query: 6   ILQRFSGLEIQNPYEQISTINQVGSILDYIDDFEYLLSLVPRLPESQSLGYFIVGLRPDV 185
           ++ R+ G  ++NP+E++ST+ Q GS+ ++++ FE L S V RLPE Q LGYF+ GL+P +
Sbjct: 140 LIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQI 199

Query: 186 KRWVHLHRPTTRLQAMYLDKDVEAMLHPSDD-GLANRFRYQSISPPGDKGRLGLMSPLGC 362
           +R V    P  R++ M + KDVE  L   DD G     +       G K   GL+   G 
Sbjct: 200 RRRVRTLNPRNRMEMMRIAKDVEDELKEEDDEGEHREVKKGGYERVGQKDWAGLLMKKGG 259

Query: 363 PELR 374
           P+ R
Sbjct: 260 PQPR 263


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
 Frame = +3

Query: 6   ILQRFSGLEIQNPYEQISTINQVGSILDYIDDFEYLLSLVPRLPESQSLGYFIVGLRPDV 185
           ++ R+ G  ++NP+E++STI Q GS+ ++++ FE L S V RLPE Q LGYF+ GL+P +
Sbjct: 123 LIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQI 182

Query: 186 KRWVHLHRPTTRLQAMYLDKDVEAMLHPSDD---------GLANRFRYQSISPPGDKGRL 338
           +R V    P  R+Q M + KDVE  L   D+         G+ +R    + +    K R 
Sbjct: 183 RRRVRTLNPLNRMQMMRIAKDVEEELKEEDEDGERSDSKKGVQDRMGRNNWAGSFQKSRS 242

Query: 339 GL--MSPLGCPEL 371
           GL    P+  P L
Sbjct: 243 GLNPRDPIRSPNL 255


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/61 (42%), Positives = 43/61 (70%)
 Frame = +3

Query: 6   ILQRFSGLEIQNPYEQISTINQVGSILDYIDDFEYLLSLVPRLPESQSLGYFIVGLRPDV 185
           +L+R+ G+   N +EQ+S + Q G+I +YI DFE L++ +P+LP  Q LGYF+ GL+  +
Sbjct: 150 LLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKI 209

Query: 186 K 188
           +
Sbjct: 210 R 210