BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040660
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   179   2e-43
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     178   5e-43
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           177   6e-43
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   177   6e-43
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                177   8e-43

>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/94 (88%), Positives = 89/94 (94%)
 Frame = -3

Query: 282 WGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASFFSKIDLRSGY 103
           WGAP+LFVRKKDG++RMCIDYR+LNKVTIKNKYPLPRIDDLFDQLQGA+ FSKIDLRSGY
Sbjct: 694 WGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGY 753

Query: 102 HQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNA 1
           HQ +V E DIPKTAFRTRYGHYEFLVM FGLTNA
Sbjct: 754 HQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNA 787


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  178 bits (451), Expect = 5e-43
 Identities = 80/94 (85%), Positives = 89/94 (94%)
 Frame = -3

Query: 282  WGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASFFSKIDLRSGY 103
            WGAP+LFV+KKDGTMRMCIDYR+LNKVT+KN+YP+PRIDDLFDQLQGA+ FSKIDLRSGY
Sbjct: 886  WGAPVLFVKKKDGTMRMCIDYRQLNKVTVKNRYPMPRIDDLFDQLQGAAVFSKIDLRSGY 945

Query: 102  HQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNA 1
            HQ ++  ADIPKTAFRTRYGHYEFLVM FGLTNA
Sbjct: 946  HQLRIRAADIPKTAFRTRYGHYEFLVMSFGLTNA 979


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/94 (87%), Positives = 89/94 (94%)
 Frame = -3

Query: 282  WGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASFFSKIDLRSGY 103
            WGAP+LFVRKKDG++RMCIDYR+LNKVTIKNKYPLPRIDDLF+QLQGA+ FSKIDLRSGY
Sbjct: 779  WGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGATCFSKIDLRSGY 838

Query: 102  HQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNA 1
            HQ +V E DIPKTAFRTRYGHYEFLVM FGLTNA
Sbjct: 839  HQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNA 872


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/94 (87%), Positives = 89/94 (94%)
 Frame = -3

Query: 282 WGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASFFSKIDLRSGY 103
           WGAP+LFVRKKDG++R+CIDYR+LNKVTIKNKYPLPRIDDLFDQLQGA+ FSKIDLRSGY
Sbjct: 700 WGAPVLFVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGY 759

Query: 102 HQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNA 1
           HQ +V E DIPKTAFRTRYGHYEFLVM FGLTNA
Sbjct: 760 HQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNA 793


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/94 (85%), Positives = 88/94 (93%)
 Frame = -3

Query: 282 WGAPILFVRKKDGTMRMCIDYRELNKVTIKNKYPLPRIDDLFDQLQGASFFSKIDLRSGY 103
           WGAP+LFV+KKDG+MR+CIDYRELN VTIKNKYPLPRIDDLFDQL GAS FSKIDLRSGY
Sbjct: 596 WGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLNGASVFSKIDLRSGY 655

Query: 102 HQFKVSEADIPKTAFRTRYGHYEFLVMPFGLTNA 1
           HQ +V++ D+PKTAFRTRYGHYEF VMPFGLTNA
Sbjct: 656 HQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNA 689