BLASTX nr result

ID: Atractylodes21_contig00040625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040625
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...    78   7e-13
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...    75   4e-12
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...    72   4e-11
ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...    65   6e-09
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...    63   2e-08

>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
 Frame = +2

Query: 17   GTTTSRSED--------TNCSDSHLKYSYKNNA-------YIVPDINNEELMASKGTVEE 151
            GT   RSE+            D HLK    + A       YI    +N +   S   +++
Sbjct: 746  GTLIDRSEEHPSYGATAVQTDDFHLKVELASTALDKELYNYIAESESNSDGGISSSKLDK 805

Query: 152  YT---HESRRENRVLPHNSLEADKSNMMEIPSDGEPIDQIEADTDCIPAHSLRFEVSKYT 322
                 HE  +E      N L   K     +P+ G   D+  ++      +SLRFEVSKYT
Sbjct: 806  GNGSEHEIEKEQ-----NPLSQTKETYNHVPALGNEADETFSNQ----VYSLRFEVSKYT 856

Query: 323  GRIHLYSCILGVEERPTPLFKNFRPE 400
            GRIHLYSCILG + RP PLF+NFRPE
Sbjct: 857  GRIHLYSCILGTDPRPQPLFENFRPE 882


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
 Frame = +2

Query: 80   KNNAYIVPDINNEELMASKGTVE------------EYTHESRRENRVLPHNSLEADKSNM 223
            +  A  VPDI  +E+  S G +E            + + +S  E+++   +++  + S  
Sbjct: 801  QTKADTVPDIEMQEVSVSSGELEGNAVTLGRVSFCKLSRQSEDEDKMHKADNIFPETS-- 858

Query: 224  MEIPSDGEPIDQIE-ADTDCIPAHSLRFEVSKYTGRIHLYSCILGVEERPTPLFKNFRPE 400
              +  DGEP+ +I+  ++       LRF+VS+YTGRIHLYSCI G++ RP PLF+NFRPE
Sbjct: 859  --LVDDGEPVQKIDMGESYPNQVDFLRFQVSQYTGRIHLYSCIPGIDSRPRPLFENFRPE 916


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
 Frame = +2

Query: 95  IVPDINNEELMASKGTVEEYTHESRRENRVLPHNSLE-------ADKSNMMEIPS----D 241
           ++ ++ +++ +A+K        E R  +RV    S E       ++K N + + +    D
Sbjct: 268 VLDNVTDKDSVANKNLEGISEIEIRSSSRVSSSESSEGHEGNDQSEKENKLCVQTTETND 327

Query: 242 GEPIDQIEADTDCIP--AHSLRFEVSKYTGRIHLYSCILGVEERPTPLFKNFRPE 400
            E   Q EAD +C     +SLRFEVSKYTGRIHLYSCILG + RP PL++NF+PE
Sbjct: 328 SELAQQNEAD-ECWSNEVYSLRFEVSKYTGRIHLYSCILGKDSRPQPLYENFQPE 381


>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
           [Glycine max]
          Length = 1193

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = +2

Query: 239 DGEPIDQIEADTDCI-PAHSLRFEVSKYTGRIHLYSCILGVEERPTPLFKNFRPE 400
           D + ++ +E +  C      LRFEVS YTGRIHLY+CILG ++RP PL +NFRPE
Sbjct: 805 DNQSVNLVEVNGHCSNQVDFLRFEVSPYTGRIHLYTCILGTDKRPQPLHENFRPE 859


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
            endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = +2

Query: 239  DGEPIDQIEADTDCIP-AHSLRFEVSKYTGRIHLYSCILGVEERPTPLFKNFRPE 400
            +GEP   IE + + +     LRFEVS+YTGR+HLY+CI G++ RP PLF NFRPE
Sbjct: 838  NGEPHLIIEPEKNSLNHVQILRFEVSQYTGRVHLYACIPGIDLRPRPLFLNFRPE 892


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