BLASTX nr result

ID: Atractylodes21_contig00040622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040622
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    74   9e-12
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    74   2e-11
emb|CBI27434.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    70   1e-10
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    70   1e-10

>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = -3

Query: 346 IPTMYLDSFQEIDQWMLFLSRNSVRELVLTNSNRHYQLPSYVFSCLELKGLNLAACIFKP 167
           + T +L    +IDQW+LFLSRN ++ELVL      +++PS +F+CL+L  L L  C F P
Sbjct: 88  LSTSFLQCRPDIDQWLLFLSRNGIKELVLELGEGEFRVPSCLFNCLKLTRLELCHCEFDP 147

Query: 166 PLEFEGFPNLKHLILRNV 113
           P  F+GF +LK L L  +
Sbjct: 148 PQYFKGFSSLKSLNLHQI 165


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = -3

Query: 316 EIDQWMLFLSRNSVRELVLT---NSNRHYQLPSYVFSCLELKGLNLAACIFKPPLEFEGF 146
           +ID+W L+L+R  V+E VL    N ++ Y++PS++FSC  L  L L  C   PP  F+GF
Sbjct: 120 DIDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSLHHLELLECWLIPPSTFQGF 179

Query: 145 PNLKHLILRNVDFRANSYRTL-ATLPQLKKLHLHSCTNVYNLNIEARTL 2
            NLK L L+ V    ++   L ++   L++L L  C    NLNI A  L
Sbjct: 180 KNLKSLDLQYVTLTKDAVENLISSCLMLERLILMECDGFKNLNIHAPNL 228


>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 KFSLHIPTMYLDSFQEIDQWMLFLSRNSVRELVLTNSN-RHYQLPSYVFSCLELKGLNLA 185
           KF L +    L+S+ +ID W+ FLS + ++E  L+ +   HY+LPSY F+ L L+ L L 
Sbjct: 123 KFVLEVDE--LESYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRHLKLR 180

Query: 184 ACIFKPPLEFEGFPNLKHLILRNVDFRANSYRTL-ATLPQLKKLHLHSCTNVYNLNIEAR 8
            C F+PP  F+GF  L  L L ++   A ++ +L ++ P L++L +       +L I A 
Sbjct: 181 GCAFRPPPRFKGFSKLISLQLEDILMDAETFGSLISSCPLLEQLTVSGYIPYDSLEISAP 240

Query: 7   TL 2
            L
Sbjct: 241 NL 242


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = -3

Query: 316 EIDQWMLFLSRNSVRELVLTN-SNRHYQLPSYVFSCLELKGLNLAACIFKPPLEFEGFPN 140
           +ID+W L L R S++E VL     + Y++ S +FSC  L  L L  C  KPP  F+GF N
Sbjct: 110 DIDRWTLHLCRKSIKEFVLEIWKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKN 169

Query: 139 LKHLILRNVDFRANSYRTL-ATLPQLKKLHLHSCTNVYNLNIEARTL 2
           LK L L++V    + +  L ++ P L++L L +     NLNI+A  L
Sbjct: 170 LKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTNLNIDAPNL 216


>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 532

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
 Frame = -3

Query: 361 KFSLHIPTMYL---DSFQEIDQWMLFLSRNSVRELVLTN--SNRHYQLPSYVFSCLELKG 197
           KF L  P   L   +S  +ID+W+L L+  S++E VL    + ++Y++P  +FSC  L+ 
Sbjct: 138 KFQLSDPGCDLSDVNSVADIDRWILRLTEKSIKEFVLQIFVAKKYYKIPQCLFSCQSLQN 197

Query: 196 LNLAACIFKPPLEFEGFPNLKHLILRNVDFRANSYRTLAT----LPQLKKLHLHSCTNVY 29
           L L  C  +PP  F+GF NLK L L  V    +++  L +    L  LK L+L   T   
Sbjct: 198 LKLDCCCIQPPTTFKGFKNLKSLELYQVTMAQDAFENLISGCHLLEDLKLLYLEGLT--- 254

Query: 28  NLNIEARTL 2
            LNI A  L
Sbjct: 255 QLNIHAPNL 263


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