BLASTX nr result

ID: Atractylodes21_contig00040585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040585
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   249   4e-64
ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   248   8e-64
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   242   3e-62
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_002887115.1| zinc finger family protein [Arabidopsis lyra...   234   1e-59

>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  249 bits (635), Expect = 4e-64
 Identities = 118/157 (75%), Positives = 129/157 (82%), Gaps = 5/157 (3%)
 Frame = -3

Query: 613 FLGHIDALRELGHCLQDGYGVCKNIAEGRRLLIQANARELAAVLSTTPSVLLSGKRLTWN 434
           FLGHIDALRELGHCLQDGYGV +N+AEGRR L+QANARELAAVLS+  S + S   LTWN
Sbjct: 197 FLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQANARELAAVLSSASSAVSSRSWLTWN 256

Query: 433 PLPH---LEGPGCPLLSDFGCNVPAPEPHPANRFLSDWFSEKP--PSQELRLCSHAGCGR 269
           P  H   + G GCPLLSDFGCNVPAPE HPA+RFL++WF+ +   P   LRLCSHAGCGR
Sbjct: 257 PHQHHRHVTGSGCPLLSDFGCNVPAPEAHPASRFLAEWFAARGGVPGPGLRLCSHAGCGR 316

Query: 268 PETRRHEFRRCSVCGEVNYCSRACQALDWKLRHKTVC 158
           PE RRHEFRRCSVCG VNYCSRACQALDWKLRHK  C
Sbjct: 317 PEMRRHEFRRCSVCGIVNYCSRACQALDWKLRHKAAC 353


>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
           gi|223545966|gb|EEF47469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score =  248 bits (632), Expect = 8e-64
 Identities = 118/159 (74%), Positives = 128/159 (80%), Gaps = 7/159 (4%)
 Frame = -3

Query: 613 FLGHIDALRELGHCLQDGYGVCKNIAEGRRLLIQANARELAAVLSTTPSVLLSGKRLTWN 434
           FLGHIDALRELGHCLQDGYGV +NIAEGRR L+QANARELAAVLS   S L +   + WN
Sbjct: 207 FLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSNPNSDLNTRAWVNWN 266

Query: 433 PLPH-----LEGPGCPLLSDFGCNVPAPEPHPANRFLSDWFSEK--PPSQELRLCSHAGC 275
           P  H       GPGCPLLSDFGCNVPAPE HPA+RF++DWF+ +   P Q LRLCSH GC
Sbjct: 267 PHAHSNHRHASGPGCPLLSDFGCNVPAPEAHPASRFMADWFATRGGSPGQGLRLCSHVGC 326

Query: 274 GRPETRRHEFRRCSVCGEVNYCSRACQALDWKLRHKTVC 158
           GRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHK  C
Sbjct: 327 GRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKEEC 365


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
           gi|449494931|ref|XP_004159686.1| PREDICTED: F-box
           protein At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  242 bits (618), Expect = 3e-62
 Identities = 117/160 (73%), Positives = 127/160 (79%), Gaps = 8/160 (5%)
 Frame = -3

Query: 613 FLGHIDALRELGHCLQDGYGVCKNIAEGRRLLIQANARELAAVLST--TPSVLLSGKRLT 440
           FLGHIDALRELGHCLQDGYGV +NI EGRR L+QANARELAAVLS+    SV  S   LT
Sbjct: 198 FLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLT 257

Query: 439 WNPLP----HLEGPGCPLLSDFGCNVPAPEPHPANRFLSDWFSEK--PPSQELRLCSHAG 278
           WN  P    H+ G GCPLLSDFGCN+PAPE HPA++FL++WF  +   P   LRLCSH G
Sbjct: 258 WNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVG 317

Query: 277 CGRPETRRHEFRRCSVCGEVNYCSRACQALDWKLRHKTVC 158
           CGRPETRRHEFRRCSVCG VNYCSRACQALDWKLRHK  C
Sbjct: 318 CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDC 357


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  236 bits (603), Expect = 2e-60
 Identities = 116/162 (71%), Positives = 127/162 (78%), Gaps = 10/162 (6%)
 Frame = -3

Query: 613 FLGHIDALRELGHCLQDGYGVCKNIAEGRRLLIQANARELAAVLSTTPSVLLSGKRLTWN 434
           FLGHIDALRELGHCLQDGYGV +N+ EGRR L+QANARELAAVLS   S L +   LTWN
Sbjct: 210 FLGHIDALRELGHCLQDGYGVRQNVTEGRRFLVQANARELAAVLSNPDSGLPTRAWLTWN 269

Query: 433 PLPHLE-------GP-GCPLLSDFGCNVPAPEPHPANRFLSDWFSEKPPS--QELRLCSH 284
           P  H         GP GCPLLSDFGCNVPAPE HPA+RF+++WF+ +  S    LRLCSH
Sbjct: 270 PHAHPNHRHPSENGPSGCPLLSDFGCNVPAPEAHPASRFMTEWFAIRGGSAGSGLRLCSH 329

Query: 283 AGCGRPETRRHEFRRCSVCGEVNYCSRACQALDWKLRHKTVC 158
            GCGRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHK  C
Sbjct: 330 TGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLRHKEEC 371


>ref|XP_002887115.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332956|gb|EFH63374.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  234 bits (596), Expect = 1e-59
 Identities = 111/155 (71%), Positives = 123/155 (79%), Gaps = 3/155 (1%)
 Frame = -3

Query: 613 FLGHIDALRELGHCLQDGYGVCKNIAEGRRLLIQANARELAAVLSTTPSVLLSGKRLTWN 434
           FLGH+DALRELGHCLQDGYGV +N++EGRR L+QANARELAAVLS+      +   L+  
Sbjct: 188 FLGHVDALRELGHCLQDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQT 247

Query: 433 PLPHLEGPGCPLLSDFGCNVPAPEPHPANRFLSDWFSEKP---PSQELRLCSHAGCGRPE 263
           P     G  CPLLSDFGCNVPAPE HPANRFL+DWF+ +    P   LRLCSHAGCGRPE
Sbjct: 248 PPVPNHGQSCPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPE 307

Query: 262 TRRHEFRRCSVCGEVNYCSRACQALDWKLRHKTVC 158
           TR+HEFRRCSVCG VNYCSRACQALDWKLRHK  C
Sbjct: 308 TRKHEFRRCSVCGVVNYCSRACQALDWKLRHKMDC 342


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