BLASTX nr result

ID: Atractylodes21_contig00040570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040570
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]    58   2e-06
ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853...    57   3e-06
ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|2...    56   8e-06

>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -2

Query: 266  RNDKPSINYRYNPHGGAFFDLVDVTQEDDAPSSHDNGKHPAKQAEAKS-SILSTADLISG 90
            + D+PS NYRY     A F+ V    ED   +  DN    AK  E+KS  ILSTA+LIS 
Sbjct: 1118 KRDQPSTNYRYKSLKQASFEFV---HEDYGGTLPDNDNRRAKVXESKSCEILSTAELISA 1174

Query: 89   VGQLWNFAASSLPVSRHRTTSTQNN 15
            VGQ+W+ A+  L + + +  S  N+
Sbjct: 1175 VGQIWDXASRPLSIFQPKANSKHND 1199


>ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera]
          Length = 703

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -2

Query: 266 RNDKPSINYRYNPHGGAFFDLVDVTQEDDAPSSHDNGKHPAKQAEAKS-SILSTADLISG 90
           + D+PS NYRY     A F+ V    ED   +  DN    AK  E+KS  ILSTA+LIS 
Sbjct: 9   KRDQPSTNYRYKSLKQASFEFV---HEDYGGTLPDNDNRRAKVMESKSCEILSTAELISA 65

Query: 89  VGQLWNFAASSLPVSRHRTTSTQNN 15
           VGQ+W+ A+  L + + +  S  N+
Sbjct: 66  VGQIWDCASRPLSIFQPKANSKHND 90


>ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|222841928|gb|EEE79475.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
 Frame = -2

Query: 290 MTGGAQSCR-NDKPSINYRYNPHGGAFFDLVDVTQEDDAPSSHDNGK-HPAKQAEAKSSI 117
           M GG +  R N  PSI Y+ N +GG  FDL D   +  +PS  +N K    K   +   I
Sbjct: 1   MYGGKRPGRGNHPPSITYKRNRNGGMPFDLADFVHDGHSPSISENNKPDDIKSGTSSPEI 60

Query: 116 LSTADLISGVGQLWN 72
            ST +L+S VGQ+WN
Sbjct: 61  FSTTELVSAVGQVWN 75


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