BLASTX nr result

ID: Atractylodes21_contig00040565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040565
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181447.2| suppressor of variegation1 causing pseudouridin...    77   2e-12
gb|AAC28994.1| unknown protein [Arabidopsis thaliana]                  77   2e-12
ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine...    76   3e-12
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...    76   3e-12
emb|CBI31423.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|NP_181447.2| suppressor of variegation1 causing pseudouridine synthase-like
           protein [Arabidopsis thaliana]
           gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
           thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
           [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
           suppressor of variegation1 causing pseudouridine
           synthase-like protein [Arabidopsis thaliana]
          Length = 410

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   VRELVKSAGLEIYSLKRIRIGAFRLPPDLLFGKHIELKAAQLKALGW 141
           VRELVK+AGLE++SLKR+RIG FRLP DL  GKH+ELK ++LKALGW
Sbjct: 362 VRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 408


>gb|AAC28994.1| unknown protein [Arabidopsis thaliana]
          Length = 86

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   VRELVKSAGLEIYSLKRIRIGAFRLPPDLLFGKHIELKAAQLKALGW 141
           VRELVK+AGLE++SLKR+RIG FRLP DL  GKH+ELK ++LKALGW
Sbjct: 38  VRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGW 84


>ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 2 [Vitis vinifera]
          Length = 335

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = +1

Query: 1   VRELVKSAGLEIYSLKRIRIGAFRLPPDLLFGKHIELKAAQLKALGW 141
           VRELVKSAGL+I+SLKRIRIG FRLP DL  GKH+ELK   LKALGW
Sbjct: 287 VRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALGW 333


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/47 (72%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   VRELVKSAGLEIYSLKRIRIGAFRLPPDLLFGKHIELKAAQLKALGW 141
           VRELVK+AGLE++SLKR+RIG FRLP DL  GKH+ELK ++LKA+GW
Sbjct: 364 VRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMGW 410


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = +1

Query: 1   VRELVKSAGLEIYSLKRIRIGAFRLPPDLLFGKHIELKAAQLKALGW 141
           VRELVKSAGL+I+SLKRIRIG FRLP DL  GKH+ELK   LKALGW
Sbjct: 248 VRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALGW 294


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