BLASTX nr result

ID: Atractylodes21_contig00040564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040564
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   119   3e-30
ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...    59   5e-07

>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  119 bits (298), Expect(2) = 3e-30
 Identities = 61/78 (78%), Positives = 62/78 (79%)
 Frame = -2

Query: 236 GRTCDGSQGSNMTTSLRSTLPRYCSMEAGGLLEVRPAFFCVVGEGLTFLTHIQSYRHGPT 57
           GRTCDGS  SN+   L      Y SMEAGGLLEVRP FF VVGEGLTFLTHI SYRHGPT
Sbjct: 89  GRTCDGSPRSNIYDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPT 148

Query: 56  DFFSIGASSSATRFYLTK 3
           D FSIGASSSATRFYLTK
Sbjct: 149 DLFSIGASSSATRFYLTK 166



 Score = 37.7 bits (86), Expect(2) = 3e-30
 Identities = 20/27 (74%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -1

Query: 354 PAGLVWLFFSIE-KESAVCASHLLLGS 277
           PAGLVWLF SIE KESAVCA     GS
Sbjct: 69  PAGLVWLFLSIEKKESAVCAGRTCDGS 95


>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/34 (85%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -1

Query: 354 PAGLVWLFFSIEK-ESAVCASHLLLGSAGRHGIL 256
           PAGLVWLF SIEK ESAVCASHLLLGSAGRH  +
Sbjct: 51  PAGLVWLFLSIEKKESAVCASHLLLGSAGRHAFV 84


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