BLASTX nr result

ID: Atractylodes21_contig00040510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040510
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250...   200   1e-49
ref|XP_002510523.1| nucleic acid binding protein, putative [Rici...   191   8e-47
ref|XP_003589472.1| hypothetical protein MTR_1g024980 [Medicago ...   181   8e-44
ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_004162557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   178   5e-43

>ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250572 [Vitis vinifera]
          Length = 419

 Score =  200 bits (509), Expect = 1e-49
 Identities = 113/188 (60%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
 Frame = +2

Query: 8   LSFMAVHTLPP----SETHKVQPTKRRRKHHSQNPKQHPNPSPSSWDQIKNLLKCKQMDV 175
           L FMA+ T  P    + T K QP+KR+RK   Q         PSSW+QIKNLL CKQ++ 
Sbjct: 18  LLFMALLTFLPEASETNTKKQQPSKRKRKQQKQ---------PSSWNQIKNLLTCKQIE- 67

Query: 176 GGSDQKVQDPPRNPNGYSKL-STCSSICSFRDVANGNTTRVVHRADNSPESSSVGQNSGL 352
                +V DP +NP GYSKL S+C SICSFRDV +GNT RVVHRADNSPESSSVGQ +GL
Sbjct: 68  ---GSQVHDPSKNPGGYSKLGSSCGSICSFRDVVHGNT-RVVHRADNSPESSSVGQETGL 123

Query: 353 LTRKK---HASSARSLT---RSNGHGSYTSSSRGMQLRKLSGCYECHAIVDPARHAIPRS 514
           L+RK      SS RSL+   RSN   +YTSSSRGMQ RKLSGCYECH IVDP R+  PR+
Sbjct: 124 LSRKTVSGSTSSTRSLSSSVRSNASATYTSSSRGMQFRKLSGCYECHMIVDPNRYPSPRT 183

Query: 515 TVCVCSEC 538
           T+C CSEC
Sbjct: 184 TICACSEC 191


>ref|XP_002510523.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551224|gb|EEF52710.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 406

 Score =  191 bits (484), Expect = 8e-47
 Identities = 109/185 (58%), Positives = 131/185 (70%), Gaps = 11/185 (5%)
 Frame = +2

Query: 17  MAVHTLPPSET-HKVQPTKRRRKHHSQNPKQHPNPSPSSWDQIKNLLKCKQMDVGGSDQK 193
           MA+ T  P +T H  QP+KR+ K   Q  KQ     PSSWDQIKNLL CKQ++       
Sbjct: 1   MALLTFLPEQTEHAKQPSKRKGKQQKQKQKQ-----PSSWDQIKNLLTCKQIE----GSS 51

Query: 194 VQDPPRNPN--GYSKL-STCSSICSFRDVANGNTTRVVHRADNSPESSSVGQNSGLLTRK 364
           V DP +N N  GYSKL S+CSSICSFRD+ +GNT RVVHRADNSPESS+VGQ +GLL+RK
Sbjct: 52  VHDPSKNSNNIGYSKLGSSCSSICSFRDIVHGNT-RVVHRADNSPESSTVGQETGLLSRK 110

Query: 365 KHA-SSARSLT---RSNG---HGSYTSSSRGMQLRKLSGCYECHAIVDPARHAIPRSTVC 523
               SS R+L    RSNG   + S+ SSSRGMQ RKLSGCYECH IVDP+R+  PR+T+C
Sbjct: 111 ATGGSSTRTLGGSGRSNGGATYSSHVSSSRGMQFRKLSGCYECHMIVDPSRYPAPRTTIC 170

Query: 524 VCSEC 538
            C++C
Sbjct: 171 TCAQC 175


>ref|XP_003589472.1| hypothetical protein MTR_1g024980 [Medicago truncatula]
           gi|355478520|gb|AES59723.1| hypothetical protein
           MTR_1g024980 [Medicago truncatula]
          Length = 403

 Score =  181 bits (458), Expect = 8e-44
 Identities = 108/185 (58%), Positives = 127/185 (68%), Gaps = 11/185 (5%)
 Frame = +2

Query: 17  MAVHTLPPSETHKVQPTKRRRKHHSQNPKQHPNPSPSSWDQIKNLLKCKQMDVGGSDQKV 196
           MA+    P ++H    T    KH  +N +Q     PSSWDQIKNLL CKQ++V     +V
Sbjct: 1   MALLNSLPEQSHPKTKTTLP-KHKQKNQQQQKQKPPSSWDQIKNLLTCKQIEVS----RV 55

Query: 197 QDP--PRNPNGYSKL-STCSSICSFRDVANGNTTRVVHRADNS-PESSSVGQNSGLLTRK 364
            DP  P N NGYSKL S+CSSICSFRDV +GNT RVVHR+DNS PESS +GQ + LL RK
Sbjct: 56  HDPSKPNNNNGYSKLGSSCSSICSFRDVVHGNT-RVVHRSDNSSPESSILGQETSLLKRK 114

Query: 365 K-HASSARSLT----RSNGHGSYTSSS--RGMQLRKLSGCYECHAIVDPARHAIPRSTVC 523
             +ASS RS +     SNG G+YTSSS  RGMQ RKLSGCYECH IVDP+R  IPRST+C
Sbjct: 115 PVNASSTRSASCSGKSSNGGGNYTSSSSSRGMQFRKLSGCYECHMIVDPSRLPIPRSTLC 174

Query: 524 VCSEC 538
            C +C
Sbjct: 175 RCDQC 179


>ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|222843706|gb|EEE81253.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  180 bits (457), Expect = 1e-43
 Identities = 101/184 (54%), Positives = 129/184 (70%), Gaps = 7/184 (3%)
 Frame = +2

Query: 8   LSFMAVHTLPPSETHKVQPTKRRRKHHSQNPKQHPNPSPSSWDQIKNLLKCKQMDVGGSD 187
           L+F+  H     E  + QP++ +RK   +  K+     PSSWDQIKNLL CKQ++     
Sbjct: 4   LTFLQEH----KENRQKQPSRCKRKLQKEKEKEK---QPSSWDQIKNLLTCKQIE----G 52

Query: 188 QKVQDPPRNPNGYSKL-STCSSICSFRDVANGNTTRVVHRADNSPESSSVGQNSGLLTRK 364
            +V DP +NP GYSKL S+CSSICSF+DV +GNT RVVHRADNSPESS++GQ +GLL+RK
Sbjct: 53  SRVHDPSKNPIGYSKLGSSCSSICSFKDVVHGNT-RVVHRADNSPESSTLGQETGLLSRK 111

Query: 365 ---KHASSARSLT---RSNGHGSYTSSSRGMQLRKLSGCYECHAIVDPARHAIPRSTVCV 526
                +SS RSLT   RSN   + +SSSRGMQ RKLSGCYECH IVDP+R+   R+T+  
Sbjct: 112 GVSTGSSSTRSLTSSGRSNSGVTCSSSSRGMQFRKLSGCYECHMIVDPSRYPSARTTISA 171

Query: 527 CSEC 538
           C++C
Sbjct: 172 CTQC 175


>ref|XP_004162557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231096 [Cucumis sativus]
          Length = 424

 Score =  178 bits (451), Expect = 5e-43
 Identities = 100/177 (56%), Positives = 124/177 (70%), Gaps = 12/177 (6%)
 Frame = +2

Query: 44  ETHKVQPTKRRRKHHSQNPKQHPNPSPSSWDQIKNLLKCKQMDVGGSDQKVQDPPRNPNG 223
           + HK   + +RRK H  NP   P+ + SSWD IKNL+ CKQ++V     +VQ+P +    
Sbjct: 9   QDHKKPLSNKRRKKHP-NPTPPPSSAQSSWDHIKNLITCKQVEVS----RVQEPGKRSPA 63

Query: 224 YSKL-STCSSICSFRDVANGNTTRVVHRADNSPESSSVGQNSGLLTRKK-HASSARSLTR 397
           YSKL S+CSSICSFRDV +GN  +VVHRADNSPESSSVGQ + LLTRK  + SS+RSLT 
Sbjct: 64  YSKLGSSCSSICSFRDVVHGNA-KVVHRADNSPESSSVGQETRLLTRKSANGSSSRSLTA 122

Query: 398 ---------SNGHGSY-TSSSRGMQLRKLSGCYECHAIVDPARHAIPRSTVCVCSEC 538
                     +G  SY +SSSRG+QLRKLSGCYECH IVDP+R  IPRS++C C +C
Sbjct: 123 PTPARTKNGGSGSASYNSSSSRGIQLRKLSGCYECHTIVDPSRLPIPRSSICPCPQC 179


Top