BLASTX nr result

ID: Atractylodes21_contig00039994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039994
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
emb|CBI25399.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    84   2e-14

>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -1

Query: 314 LGLRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDELREKIKAMGYV 135
           L LRNVMK++GVKKEPGYSWISV+G VHKF + DQ+HP+K ++Y  L+ELREKIKAMGYV
Sbjct: 750 LSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYV 809

Query: 134 PDLRYALES 108
           PDLRY L +
Sbjct: 810 PDLRYVLNN 818


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = -1

Query: 314 LGLRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDELREKIKAMGYV 135
           L LR+VMKE+GVKKEPG SWISV G++HKF A DQ+HPEKDK+Y  L+EL+ K+ ++  V
Sbjct: 700 LSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDV 759

Query: 134 PDLRYAL 114
           PDL Y L
Sbjct: 760 PDLSYEL 766


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = -1

Query: 314 LGLRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDELREKIKAM 144
           L LRNVMK++GVKKEPGYSWISV+G VHKF + DQ+HP+K ++Y  L+ELREKIKAM
Sbjct: 696 LSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 752


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/67 (62%), Positives = 54/67 (80%)
 Frame = -1

Query: 314 LGLRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDELREKIKAMGYV 135
           L LR++MKE+GVKKEPG SWISV G++HKF A DQ+HPEKDK+Y  L+EL+ K+ ++  V
Sbjct: 700 LSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDV 759

Query: 134 PDLRYAL 114
           PDL Y L
Sbjct: 760 PDLSYEL 766


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = -1

Query: 308 LRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDELREKIKAMGYVPD 129
           LR +MKERGVKKEPG SWI V G VH F A DQ HP  +++Y  L+ L ++IK++GYVPD
Sbjct: 673 LRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPD 732

Query: 128 LRYAL 114
            R+ +
Sbjct: 733 TRFVM 737


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