BLASTX nr result

ID: Atractylodes21_contig00039973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039973
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   128   4e-28
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   117   1e-24
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   112   2e-23
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   100   2e-19
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    97   1e-18

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  128 bits (322), Expect = 4e-28
 Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 30/195 (15%)
 Frame = -2

Query: 497 ENKRRGITCWEELKRLLLSQFRSTSEGSLCEQFLAVRQEGTVAEYKRRFVAMAAPLDGIP 318
           ENKRR    WE +K  +L+QFR  + GSL EQ+L+  Q  +V EY+R+FV  AAPLDGIP
Sbjct: 227 ENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIP 286

Query: 317 EDVFVGQFINGLSLEVRAEVRLLSPSGLNKAMDVATMVEERNKV---------------V 183
           E++ +G+FI+GL+ E+++E+R+L+P  L++AM++A  +EERN+V                
Sbjct: 287 EEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIY 346

Query: 182 WRGKNTRPFSVPK------------KSW---DNSTDEXXXXXXXXXXXXXXAPEFRRLAD 48
            RG N+ P S+P             KSW    N++                  E RRL +
Sbjct: 347 NRGPNSNP-SLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTE 405

Query: 47  KEMQLRRQQGLCYRC 3
           KE+Q +R +GLC++C
Sbjct: 406 KELQEKRAKGLCFKC 420


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  117 bits (293), Expect = 1e-24
 Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
 Frame = -2

Query: 470  WEELKRLLLSQFRSTSEGSLCEQFLAVRQEGTVAEYKRRFVAMAAPLDGIPEDVFVGQFI 291
            WE LKR LL +FR T EGSLCEQFLAVRQ+GTVA Y R F  +  PL GI E+V    F+
Sbjct: 832  WENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFM 891

Query: 290  NGLSLEVRAEVRLLSPSGLNKAMDVATMVEERNKVVWRG------KNTRPFSVPKK-SW- 135
            NGL  E+RAE RLL P GL   M++A  VE+RN  +         K+T+  S   +  W 
Sbjct: 892  NGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWK 951

Query: 134  --DNSTDEXXXXXXXXXXXXXXAPEFRRLADKEMQLRRQQGLCYRC 3
              +N                   P  +RL + E+Q RR++GL ++C
Sbjct: 952  IGENFQTRAVAVGEKTMSQRREIP-IKRLTESELQARREKGLWFKC 996


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  112 bits (281), Expect = 2e-23
 Identities = 71/203 (34%), Positives = 101/203 (49%), Gaps = 38/203 (18%)
 Frame = -2

Query: 497 ENKRRGITCWEELKRLLLSQFRSTSEGSLCEQFLAVRQEGTVAEYKRRFVAMAAPLDGIP 318
           EN+RR I  W E++ +LL +FR T+ GSL EQ+L+  QE  V EY+R+F+ + APL+GIP
Sbjct: 152 ENRRRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGIP 211

Query: 317 EDVFVGQFINGLSLEVRAEVRLLSPSGLNKAMDVATMVEE----RNKVVWRGK------- 171
           E +   QF++ L  E++ EVR++ PS L+ AM++A  VEE    R K  W  K       
Sbjct: 212 ESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAH 271

Query: 170 --------------------------NTRPFSVPKKSWDNSTD-EXXXXXXXXXXXXXXA 72
                                     NT     P  S  +ST                  
Sbjct: 272 NPNSYIPKPTLSAKPTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPF 331

Query: 71  PEFRRLADKEMQLRRQQGLCYRC 3
            E RRL++KE+Q +R+ GLC+RC
Sbjct: 332 GEIRRLSEKELQYKREHGLCFRC 354


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 24/186 (12%)
 Frame = -2

Query: 488 RRGITCWEELKRLLLSQFRSTSEGSLCEQFLAVRQEGTVAEYKRRFVAMAAPLDGIPEDV 309
           R+    W+ELK  + ++FR    G+ C +FLA++QEG+V+EY ++F  ++APL  + E+V
Sbjct: 124 RKWFRSWKELKERMYNRFRCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLPEMAEEV 183

Query: 308 FVGQFINGLSLEVRAEVRLLSPSGLNKAMDVATMVEERNKVVWRGKNTRPFS-------- 153
             G F NGL   +R EV  +   GL   M+ A + EE+ +V   G    P+S        
Sbjct: 184 LEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEAAKTNL 243

Query: 152 ----------------VPKKSWDNSTDEXXXXXXXXXXXXXXAPEFRRLADKEMQLRRQQ 21
                           + KK  + +++                P +RR  D ++Q R+++
Sbjct: 244 GSSPKTFGSPPTKMVTLAKKVVNQTSNSNTSQSHTVGGGGRREPSYRRWIDSKLQARKEK 303

Query: 20  GLCYRC 3
           GLCYRC
Sbjct: 304 GLCYRC 309


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
 Frame = -2

Query: 497 ENKRRGITCWEELKRLLLSQFRSTSEGSLCEQFLAVRQEGTVAEYKRRFVAMAAPLDGIP 318
           E  RR    W + K  L+  FRST EG+L +Q LA++Q  TV E++R+F  +AAPL G+ 
Sbjct: 158 EEGRRPFRSWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLA 217

Query: 317 EDVFVGQFINGLSLEVRAEVRLLSPSGLNKAMDVATMVEERNKVVWRGKNT--------- 165
           EDV    F+NGL  +++AE+R  SP GL+K M VA  +EE+ K + +   T         
Sbjct: 218 EDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEKLKALGQYNQTTQNRWANST 277

Query: 164 -------------------RPFSVPKK--SWDNST-DEXXXXXXXXXXXXXXAPEFRRLA 51
                              +P   PK   S  NST  +               P F++++
Sbjct: 278 PSGTHFTNKVTQVSTTPSIKPNHFPKSFTSSSNSTVAKPSGSVSTSTGSNNTRPPFKQMS 337

Query: 50  DKEMQLRRQQGLCYRC 3
             EM+  R +GL YRC
Sbjct: 338 HGEMEACRLKGLYYRC 353


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