BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039954
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...   130   1e-28
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   127   7e-28
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22

>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  143 bits (361), Expect = 1e-32
 Identities = 63/104 (60%), Positives = 81/104 (77%)
 Frame = -1

Query: 313 GYDDHPVVNFKLQRSYSSFGRLDLSLALFNRTHNPNVFFYTSIIHAHAFDNLHTRGMQLY 134
           G D HP++NFKLQRSY+S GRLD S+ALF RT NP+VFF+T+IIH HA   LH + +  Y
Sbjct: 57  GLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFY 116

Query: 133 IQMISQDVEPNEFTLSAVLKGCPLEPGKVLHPHAIKLGFDCNMH 2
            QM++Q VEPN FT S++LK CP+EPGK LH  A+KLGFD +++
Sbjct: 117 AQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLY 160


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/100 (58%), Positives = 75/100 (75%)
 Frame = -1

Query: 301 HPVVNFKLQRSYSSFGRLDLSLALFNRTHNPNVFFYTSIIHAHAFDNLHTRGMQLYIQMI 122
           HP+++FKLQRSYSS G L+ SL LFN+T NPNVFFYTSIIHAH F  LH + +  Y QM+
Sbjct: 65  HPILSFKLQRSYSSLGHLNHSLTLFNQTQNPNVFFYTSIIHAHTFHKLHYQALLFYAQML 124

Query: 121 SQDVEPNEFTLSAVLKGCPLEPGKVLHPHAIKLGFDCNMH 2
           +Q V PN FT S++LK CPLE  +++H  AIK G D +++
Sbjct: 125 TQKVTPNAFTFSSILKSCPLEFAQIIHAQAIKFGLDSDLY 164


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/94 (60%), Positives = 73/94 (77%)
 Frame = -1

Query: 283 KLQRSYSSFGRLDLSLALFNRTHNPNVFFYTSIIHAHAFDNLHTRGMQLYIQMISQDVEP 104
           KLQRSY+S GRLD S+ALF RT NP+VFF+T+IIH HA   LH + +  Y QM++Q VEP
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 103 NEFTLSAVLKGCPLEPGKVLHPHAIKLGFDCNMH 2
           N FT S++LK CP+EPGK LH  A+KLGFD +++
Sbjct: 74  NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLY 107


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/104 (49%), Positives = 71/104 (68%)
 Frame = -1

Query: 313 GYDDHPVVNFKLQRSYSSFGRLDLSLALFNRTHNPNVFFYTSIIHAHAFDNLHTRGMQLY 134
           G   HP++NFKLQRSY+S G L  S+ LF+RT NPNVF +T II+AHA  +L    +  Y
Sbjct: 50  GLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYY 109

Query: 133 IQMISQDVEPNEFTLSAVLKGCPLEPGKVLHPHAIKLGFDCNMH 2
            QM++  ++PN FTLS++LK C L P + +H HAIK G   +++
Sbjct: 110 SQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHLY 153


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/104 (51%), Positives = 70/104 (67%)
 Frame = -1

Query: 313 GYDDHPVVNFKLQRSYSSFGRLDLSLALFNRTHNPNVFFYTSIIHAHAFDNLHTRGMQLY 134
           G   +P++NFKLQRSY++ GRLD S+ +FN    PNVF +++IIH+H    L  R    Y
Sbjct: 74  GLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYY 133

Query: 133 IQMISQDVEPNEFTLSAVLKGCPLEPGKVLHPHAIKLGFDCNMH 2
            QM+S  VEPN FT S+VLK C LE GKVLH  AIKLG   +++
Sbjct: 134 SQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLY 177