BLASTX nr result

ID: Atractylodes21_contig00039898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039898
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439156.1| hypothetical protein SORBIDRAFT_09g001480 [S...    92   6e-17
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    91   1e-16
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    91   1e-16
ref|NP_189621.1| General transcription factor 2-related zinc fin...    91   1e-16
ref|NP_189620.1| General transcription factor 2-related zinc fin...    89   5e-16

>ref|XP_002439156.1| hypothetical protein SORBIDRAFT_09g001480 [Sorghum bicolor]
           gi|241944441|gb|EES17586.1| hypothetical protein
           SORBIDRAFT_09g001480 [Sorghum bicolor]
          Length = 524

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/89 (50%), Positives = 59/89 (66%)
 Frame = -3

Query: 268 YYVHCFAHXXXXXXXXXAKEHDGAVNFFELMSILTNVVCASCKRKDMIRESQKEKVQEAX 89
           YYVHCFAH         AK++D   +FF+++S+L NV  ASCKR+DMIR+SQ+E+V++A 
Sbjct: 112 YYVHCFAHQLQLVIVAVAKKNDDISDFFDMISLLLNVAGASCKREDMIRQSQQERVKKAI 171

Query: 88  XXXXXXXXXXINQELSLSRAGDTRWGSHY 2
                     +NQE SL R GDTRW SHY
Sbjct: 172 GSGQISTGTGLNQEQSLQRPGDTRWCSHY 200


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/89 (51%), Positives = 55/89 (61%)
 Frame = -3

Query: 268 YYVHCFAHXXXXXXXXXAKEHDGAVNFFELMSILTNVVCASCKRKDMIRESQKEKVQEAX 89
           YYVHCFAH         AK+H     FF ++S+L NVV ASCKRKD IRE  ++KV+E  
Sbjct: 401 YYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQKVEEKI 460

Query: 88  XXXXXXXXXXINQELSLSRAGDTRWGSHY 2
                     +NQELSL R G+TRWGSHY
Sbjct: 461 SNGEIKTGTGLNQELSLQRPGNTRWGSHY 489


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/89 (51%), Positives = 55/89 (61%)
 Frame = -3

Query: 268 YYVHCFAHXXXXXXXXXAKEHDGAVNFFELMSILTNVVCASCKRKDMIRESQKEKVQEAX 89
           YYVHCFAH         AK+H     FF ++S+L NVV ASCKRKD IRE  ++KV+E  
Sbjct: 359 YYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIHRQKVEEKI 418

Query: 88  XXXXXXXXXXINQELSLSRAGDTRWGSHY 2
                     +NQELSL R G+TRWGSHY
Sbjct: 419 SNGEIKTGTGLNQELSLQRPGNTRWGSHY 447


>ref|NP_189621.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644086|gb|AEE77607.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 536

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/89 (51%), Positives = 55/89 (61%)
 Frame = -3

Query: 268 YYVHCFAHXXXXXXXXXAKEHDGAVNFFELMSILTNVVCASCKRKDMIRESQKEKVQEAX 89
           YYVHCFAH         AK+H     FF ++S+L NVV ASCKRKD IRE  ++KV+E  
Sbjct: 126 YYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKRKDKIREIDRQKVEEKI 185

Query: 88  XXXXXXXXXXINQELSLSRAGDTRWGSHY 2
                     +NQELSL R G+TRWGSHY
Sbjct: 186 SNGEIKTGTGLNQELSLQRPGNTRWGSHY 214


>ref|NP_189620.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644085|gb|AEE77606.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 505

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/89 (50%), Positives = 54/89 (60%)
 Frame = -3

Query: 268 YYVHCFAHXXXXXXXXXAKEHDGAVNFFELMSILTNVVCASCKRKDMIRESQKEKVQEAX 89
           YYVHCFAH         AK+H     FF ++S+L NVV A CKRKD IRE  ++KV+E  
Sbjct: 227 YYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGAFCKRKDKIREIDRQKVEEKI 286

Query: 88  XXXXXXXXXXINQELSLSRAGDTRWGSHY 2
                     +NQELSL R G+TRWGSHY
Sbjct: 287 SNGEIKTGTRLNQELSLQRPGNTRWGSHY 315


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