BLASTX nr result

ID: Atractylodes21_contig00039896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039896
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    79   1e-15
ref|XP_003601918.1| Disease resistance protein [Medicago truncat...    60   5e-10
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    67   2e-09
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    67   2e-09
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    65   6e-09

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 79.3 bits (194), Expect(2) = 1e-15
 Identities = 33/61 (54%), Positives = 49/61 (80%)
 Frame = -3

Query: 183  ETDSRPGFRLSEGILLHKGILVLAAQSTCIPIIMNEFHSSLLGGHSGFLRTYKRVSANVY 4
            +  SRPG+ L +G+LL++G LV++++S  IP ++ EFHS+  GGHSGF RTY+R++ANVY
Sbjct: 833  DASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANVY 892

Query: 3    W 1
            W
Sbjct: 893  W 893



 Score = 28.1 bits (61), Expect(2) = 1e-15
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -2

Query: 298 EELELRELTSFPVWTDLQQIQQEVAVDLFLQQVIRDLERD 179
           E+ EL +  +   W D + +++E++ D  LQ++I DL+RD
Sbjct: 794 EDGELCQGITSVQWKDEKLLREELSRDSQLQKIIGDLQRD 833


>ref|XP_003601918.1| Disease resistance protein [Medicago truncatula]
           gi|355490966|gb|AES72169.1| Disease resistance protein
           [Medicago truncatula]
          Length = 263

 Score = 60.1 bits (144), Expect(2) = 5e-10
 Identities = 27/60 (45%), Positives = 41/60 (68%)
 Frame = -3

Query: 180 TDSRPGFRLSEGILLHKGILVLAAQSTCIPIIMNEFHSSLLGGHSGFLRTYKRVSANVYW 1
           TDS+ G+ L  G L +K ILV++A+S  I  ++ +FHSS  GGH G+L+TY+R++    W
Sbjct: 108 TDSKGGYSLKGGTLFYKNILVISAKSAIIEDLLIDFHSSPSGGHFGYLQTYRRMAVRFPW 167



 Score = 28.5 bits (62), Expect(2) = 5e-10
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -2

Query: 298 EELELRELTSFPVWTDLQQIQQEVAVD 218
           E++E+R + S+P+W    ++QQ V  D
Sbjct: 51  EDMEVRTMLSYPIWQHRSRLQQVVLKD 77


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -3

Query: 183  ETDSRPGFRLSEGILLHKGILVLAAQSTCIPIIMNEFHSSLLGGHSGFLRTYKRVSANVY 4
            + DS P + + +G L +KG LVL   S+ +P I++ FH  ++GGHSG LRTYKR++A +Y
Sbjct: 834  DPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAELY 893

Query: 3    W 1
            W
Sbjct: 894  W 894


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -3

Query: 183  ETDSRPGFRLSEGILLHKGILVLAAQSTCIPIIMNEFHSSLLGGHSGFLRTYKRVSANVY 4
            + D+ P + L  GILL+KG LVL   S  +P ++ E H+S++GGHSGFL TYKR++ + +
Sbjct: 1689 DPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHASVVGGHSGFLXTYKRLTRDFF 1748

Query: 3    W 1
            W
Sbjct: 1749 W 1749


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/62 (43%), Positives = 43/62 (69%)
 Frame = -3

Query: 186 NETDSRPGFRLSEGILLHKGILVLAAQSTCIPIIMNEFHSSLLGGHSGFLRTYKRVSANV 7
           ++ D+ P + L  GIL++KG LV    S  +P ++ E H+S++GGHSGFL TYKR++ + 
Sbjct: 549 DDLDAYPRYALDHGILIYKGCLVFPKASPLVPALLQEGHASVVGGHSGFLWTYKRLTRDF 608

Query: 6   YW 1
           +W
Sbjct: 609 FW 610


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