BLASTX nr result

ID: Atractylodes21_contig00039886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039886
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512988.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
gb|AFK40340.1| unknown [Lotus japonicus]                               90   2e-16
ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like...    86   2e-15
ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002533806.1| conserved hypothetical protein [Ricinus comm...    84   9e-15

>ref|XP_002512988.1| conserved hypothetical protein [Ricinus communis]
           gi|223547999|gb|EEF49491.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  AVLKRVVQMGISSGFQVKSMK---SNMHGFTTASLVTKQFCESQCDYGYRRHLSQLVNPN 210
           A+ KR +Q+G +S F   + +   S+    +++S +  +F     DY   R +SQLVNPN
Sbjct: 2   ALTKRAIQLGSNSSFYFTAFRLIHSSSSSSSSSSSIANRF-----DY---RQISQLVNPN 53

Query: 211 GKRVCLVDTLALVRRLEAQGVPSKQAEAITSAITEVLNDSLE 336
           GKR  LVDTLALVR LEAQGVPSKQAEAITSAITEVLNDSLE
Sbjct: 54  GKRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLE 95


>gb|AFK40340.1| unknown [Lotus japonicus]
          Length = 236

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/101 (51%), Positives = 63/101 (62%)
 Frame = +1

Query: 34  MSAVLKRVVQMGISSGFQVKSMKSNMHGFTTASLVTKQFCESQCDYGYRRHLSQLVNPNG 213
           M  + KRV Q+    GF+V  ++S+         +      S       RH+S+LV  NG
Sbjct: 1   MGVICKRVKQLARFGGFRVSKVQSSFE-----RPICNPLSASSPSVSGTRHISELVKSNG 55

Query: 214 KRVCLVDTLALVRRLEAQGVPSKQAEAITSAITEVLNDSLE 336
           K + LVDTLALVRRLE QGVPSKQAEAIT+AIT VLNDSLE
Sbjct: 56  KHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLE 96


>ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like [Cucumis sativus]
           gi|449515255|ref|XP_004164665.1| PREDICTED: protein
           FMP32, mitochondrial-like [Cucumis sativus]
          Length = 249

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
 Frame = +1

Query: 40  AVLKRVVQMGISSGFQ------VKSMKSNMHGFTTASLVTKQFCESQCDYGYRRHLSQLV 201
           A  KRV Q+  +SG +      V S +S++   +  +L       S+  +   R +SQLV
Sbjct: 5   AACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQISQLV 64

Query: 202 NPNGKRVCLVDTLALVRRLEAQGVPSKQAEAITSAITEVLNDSLE 336
             NGKR+ LVDTLALVR+LE QGVPS QAEAIT+AITEVLNDSLE
Sbjct: 65  KSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLE 109


>ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|222849421|gb|EEE86968.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = +1

Query: 40  AVLKRVVQMGISSG-FQVKSMKSNMHGFTTASLVTKQFCESQCDYGYRRHLSQLVNPNG- 213
           A+  RVV+ G++S  F  KS   N    +++S    +F     DY   RH+SQLV PN  
Sbjct: 2   ALCSRVVRSGVNSAIFFAKSRAINP---SSSSSFGNRF-----DY---RHISQLVRPNNN 50

Query: 214 KRVCLVDTLALVRRLEAQGVPSKQAEAITSAITEVLNDSLE 336
           KR  LVDTLALVR LE+QGVPSKQAEAIT+AITEVLNDSLE
Sbjct: 51  KRAFLVDTLALVRGLESQGVPSKQAEAITAAITEVLNDSLE 91


>ref|XP_002533806.1| conserved hypothetical protein [Ricinus communis]
           gi|223526260|gb|EEF28575.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = +1

Query: 181 RHLSQLVNPNGKRVCLVDTLALVRRLEAQGVPSKQAEAITSAITEVLNDSLE 336
           R +SQ V  NG+RV LVDTLALVRRLEAQGVPSKQAEAIT AITEVLNDSLE
Sbjct: 47  RQISQFVKSNGRRVFLVDTLALVRRLEAQGVPSKQAEAITGAITEVLNDSLE 98


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