BLASTX nr result

ID: Atractylodes21_contig00039846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039846
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...   152   2e-35
emb|CBI41034.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...   152   2e-35
emb|CBI35709.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   144   6e-33

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  152 bits (385), Expect = 2e-35
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -3

Query: 298 SRVFPTKIQAENHHLWKMAERLGATCATEVDPSVTHVISTDIGTEKSRWAVQQKKFLVEP 119
           SRVFPT+ QAENHHLW+MAE+LGATCATE+DPSVTHV+STD GTEKSRWA+Q+KKFLV P
Sbjct: 193 SRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHP 252

Query: 118 RWLEATNYMWQRQPEELFPVNEIKKQ 41
            W+EA NY WQ+QPEE FPVN+ K Q
Sbjct: 253 GWIEAANYFWQKQPEENFPVNQKKNQ 278


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  152 bits (385), Expect = 2e-35
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -3

Query: 298 SRVFPTKIQAENHHLWKMAERLGATCATEVDPSVTHVISTDIGTEKSRWAVQQKKFLVEP 119
           SRVFPT+ QAENHHLW+MAE+LGATCATE+DPSVTHV+STD GTEKSRWA+Q+KKFLV P
Sbjct: 179 SRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHP 238

Query: 118 RWLEATNYMWQRQPEELFPVNEIKKQ 41
            W+EA NY WQ+QPEE FPVN+ K Q
Sbjct: 239 GWIEAANYFWQKQPEENFPVNQKKNQ 264


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  152 bits (385), Expect = 2e-35
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -3

Query: 298 SRVFPTKIQAENHHLWKMAERLGATCATEVDPSVTHVISTDIGTEKSRWAVQQKKFLVEP 119
           SRVFPT+ QAENHHLW+MAE+LGATCATE+DPSVTHV+STD GTEKSRWA+Q+KKFLV P
Sbjct: 193 SRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHP 252

Query: 118 RWLEATNYMWQRQPEELFPVNEIKKQ 41
            W+EA NY WQ+QPEE FPVN+ K Q
Sbjct: 253 GWIEAANYFWQKQPEENFPVNQKKNQ 278


>emb|CBI35709.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  147 bits (370), Expect = 1e-33
 Identities = 64/80 (80%), Positives = 73/80 (91%)
 Frame = -3

Query: 298 SRVFPTKIQAENHHLWKMAERLGATCATEVDPSVTHVISTDIGTEKSRWAVQQKKFLVEP 119
           SRVFPT+ QAENHHLW+MAE+LGATCATE+DPSVTHV+STD GTEKSRWA+Q+KKFLV P
Sbjct: 179 SRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHP 238

Query: 118 RWLEATNYMWQRQPEELFPV 59
            W+EA NY WQ+QPEE FPV
Sbjct: 239 GWIEAANYFWQKQPEENFPV 258


>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/84 (76%), Positives = 74/84 (88%)
 Frame = -3

Query: 298 SRVFPTKIQAENHHLWKMAERLGATCATEVDPSVTHVISTDIGTEKSRWAVQQKKFLVEP 119
           SRVFPT+ QA+NHHLWKMAE+LGATC+ EVDPSVTHV+S + GTEKSRWA++  KFLV P
Sbjct: 391 SRVFPTQFQADNHHLWKMAEQLGATCSREVDPSVTHVVSAEAGTEKSRWALKNDKFLVHP 450

Query: 118 RWLEATNYMWQRQPEELFPVNEIK 47
           RW+EATNYMWQRQPEE F VN+ K
Sbjct: 451 RWIEATNYMWQRQPEENFSVNQPK 474


Top