BLASTX nr result

ID: Atractylodes21_contig00039809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039809
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   231   6e-59
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45

>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/151 (72%), Positives = 136/151 (90%)
 Frame = +2

Query: 2   FDSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFD 181
           FDSDVY +NTLINMYAVCG+M DARK+FDESP+ DSVSWNSILAGYV+ G+VEEAKLIFD
Sbjct: 172 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231

Query: 182 QMPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVM 361
           QMP++NI+ASNSMIVL G+ G + EA++LF +M+EKD+VSW+A+IS YEQ GMY+EALVM
Sbjct: 232 QMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291

Query: 362 FMEMNSRGIKIDEVVVISVLSACAQSLVVKT 454
           F+EMN+ G+++DEVVV+SVLSACA   +VKT
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKT 322



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/142 (36%), Positives = 80/142 (56%)
 Frame = +2

Query: 5   DSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQ 184
           +S V  +N LI+MY+  G++ DA+K+F+ S   D +SWNS+++G ++ G+VE+A+ +FD 
Sbjct: 336 ESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDV 395

Query: 185 MPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMF 364
           MPEK+I                               VSW+AVIS Y Q   + E L +F
Sbjct: 396 MPEKDI-------------------------------VSWSAVISGYAQHDCFSETLALF 424

Query: 365 MEMNSRGIKIDEVVVISVLSAC 430
            EM    I+ DE +++SV+SAC
Sbjct: 425 HEMQLGQIRPDETILVSVISAC 446



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 39/179 (21%)
 Frame = +2

Query: 11  DVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQM- 187
           D  + N++I+    CG +  AR +FD  P KD VSW+++++GY Q     E   +F +M 
Sbjct: 369 DQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQ 428

Query: 188 -----PEK---------------------------------NIIASNSMIVLFGRCGLIA 253
                P++                                 N+I   +++ ++ +CG + 
Sbjct: 429 LGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVE 488

Query: 254 EAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEMNSRGIKIDEVVVISVLSAC 430
            A ++F  M EK + SW A+I      G+ + +L MF EM + G+  +E+  + VL AC
Sbjct: 489 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGAC 547


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  216 bits (549), Expect = 2e-54
 Identities = 104/151 (68%), Positives = 131/151 (86%)
 Frame = +2

Query: 2   FDSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFD 181
           FDSDVY +NTLINMYAVCG+++DARKVFD S + D VSWNS+LAGYV +GNVEEAK ++D
Sbjct: 157 FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYD 216

Query: 182 QMPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVM 361
           +MPE+N+IASNSMIVLFG+ G + EA +LF +M +KDLVSW+A+ISCYEQ  MY+EAL++
Sbjct: 217 RMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALIL 276

Query: 362 FMEMNSRGIKIDEVVVISVLSACAQSLVVKT 454
           F EMN+ GI +DEVVV+SVLSAC++ LVV T
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVIT 307



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/139 (37%), Positives = 77/139 (55%)
 Frame = +2

Query: 14  VYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQMPE 193
           V  +N LI+MY+ C ++  A+K+F ES   D +SWNS+++GYV+ G +E+A+ +FD MP+
Sbjct: 324 VNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPD 383

Query: 194 KNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEM 373
           K                               D VSW+A+IS Y Q   + E LV+F EM
Sbjct: 384 K-------------------------------DNVSWSAMISGYAQQDRFTETLVLFQEM 412

Query: 374 NSRGIKIDEVVVISVLSAC 430
              G K DE +++SV+SAC
Sbjct: 413 QIEGTKPDETILVSVISAC 431



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 39/179 (21%)
 Frame = +2

Query: 11  DVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQM- 187
           D  + N++I+ Y  CG++  AR +FD  P KD+VSW+++++GY Q     E  ++F +M 
Sbjct: 354 DQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQ 413

Query: 188 -----PEK---------------------------------NIIASNSMIVLFGRCGLIA 253
                P++                                 NII   ++I ++ + G + 
Sbjct: 414 IEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVE 473

Query: 254 EAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEMNSRGIKIDEVVVISVLSAC 430
           +A ++F  + EK + +W A+I      G+  ++L  F EM   G+  +E+  ++VL AC
Sbjct: 474 DALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC 532


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/149 (63%), Positives = 123/149 (82%)
 Frame = +2

Query: 2   FDSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFD 181
           FDSDVY RNTLIN ++VC +MTDA +VF+ES + DSVSWNSILAGY+++GNVEEAK I+ 
Sbjct: 244 FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYH 303

Query: 182 QMPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVM 361
           QMPE++IIASNSMIVLFG  GL+ EA +LF +M EKD+V+W+A+I+C++Q  MY+EA+  
Sbjct: 304 QMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 363

Query: 362 FMEMNSRGIKIDEVVVISVLSACAQSLVV 448
           F+ M+  G+ +DEVV +S LSACA  LVV
Sbjct: 364 FVGMHKIGVMVDEVVAVSALSACANLLVV 392



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/144 (36%), Positives = 80/144 (55%)
 Frame = +2

Query: 5   DSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQ 184
           +S +  +N LI MY+ CGD+  ARK+FDE+ + D +SWNS+++GY++   V+ AK IFD 
Sbjct: 408 ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDS 467

Query: 185 MPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMF 364
           MPEK++++ +SM                               IS Y Q  ++ E L +F
Sbjct: 468 MPEKDVVSWSSM-------------------------------ISGYAQNDLFDETLALF 496

Query: 365 MEMNSRGIKIDEVVVISVLSACAQ 436
            EM   G K DE  ++SV+SACA+
Sbjct: 497 QEMQMSGFKPDETTLVSVISACAR 520



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 39/179 (21%)
 Frame = +2

Query: 11  DVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQM- 187
           D+ + N++I+ Y  C  + +A+ +FD  P KD VSW+S+++GY Q    +E   +F +M 
Sbjct: 441 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 500

Query: 188 -----PEK---------------------------------NIIASNSMIVLFGRCGLIA 253
                P++                                 N+I   ++I ++ +CG + 
Sbjct: 501 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 560

Query: 254 EAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEMNSRGIKIDEVVVISVLSAC 430
            A ++F  M EK + +W A+I      G+ + +L MF  M    +  +E+  + VL AC
Sbjct: 561 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC 619


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/149 (63%), Positives = 123/149 (82%)
 Frame = +2

Query: 2   FDSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFD 181
           FDSDVY RNTLIN ++VC +MTDA +VF+ES + DSVSWNSILAGY+++GNVEEAK I+ 
Sbjct: 109 FDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYH 168

Query: 182 QMPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVM 361
           QMPE++IIASNSMIVLFG  GL+ EA +LF +M EKD+V+W+A+I+C++Q  MY+EA+  
Sbjct: 169 QMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228

Query: 362 FMEMNSRGIKIDEVVVISVLSACAQSLVV 448
           F+ M+  G+ +DEVV +S LSACA  LVV
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVV 257



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/144 (36%), Positives = 80/144 (55%)
 Frame = +2

Query: 5   DSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQ 184
           +S +  +N LI MY+ CGD+  ARK+FDE+ + D +SWNS+++GY++   V+ AK IFD 
Sbjct: 273 ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDS 332

Query: 185 MPEKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMF 364
           MPEK++++ +SM                               IS Y Q  ++ E L +F
Sbjct: 333 MPEKDVVSWSSM-------------------------------ISGYAQNDLFDETLALF 361

Query: 365 MEMNSRGIKIDEVVVISVLSACAQ 436
            EM   G K DE  ++SV+SACA+
Sbjct: 362 QEMQMSGFKPDETTLVSVISACAR 385



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 39/179 (21%)
 Frame = +2

Query: 11  DVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQM- 187
           D+ + N++I+ Y  C  + +A+ +FD  P KD VSW+S+++GY Q    +E   +F +M 
Sbjct: 306 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 365

Query: 188 -----PEK---------------------------------NIIASNSMIVLFGRCGLIA 253
                P++                                 N+I   ++I ++ +CG + 
Sbjct: 366 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 425

Query: 254 EAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEMNSRGIKIDEVVVISVLSAC 430
            A ++F  M EK + +W A+I      G+ + +L MF  M    +  +E+  + VL AC
Sbjct: 426 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC 484


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  187 bits (474), Expect = 1e-45
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 2/152 (1%)
 Frame = +2

Query: 2   FDSDVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFD 181
           FD DVY RNTL+N+YAVCG +  AR+VF+ESP+ D VSWN++LAGYVQ G VEEA+ +F+
Sbjct: 136 FDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFE 195

Query: 182 QMPEKNIIASNSMIVLFGRCGLIAEAYQLF--VDMNEKDLVSWTAVISCYEQTGMYQEAL 355
            MPE+N IASNSMI LFGR G + +A ++F  V   E+D+VSW+A++SCYEQ  M +EAL
Sbjct: 196 GMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEAL 255

Query: 356 VMFMEMNSRGIKIDEVVVISVLSACAQSLVVK 451
           V+F+EM   G+ +DEVVV+S LSAC++ L V+
Sbjct: 256 VLFVEMKGSGVAVDEVVVVSALSACSRVLNVE 287



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
 Frame = +2

Query: 14  VYARNTLINMYAVCGDMTDARKVFDES-PMKDSVSWNSILAGYVQMGNVEEAKLIFDQMP 190
           V  +N LI++Y+ CG++ DAR++FD+   + D +SWNS+++GY++ G++++A+++F  MP
Sbjct: 305 VSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMP 364

Query: 191 EKNIIASNSMIVLFGRCGLIAEAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFME 370
           EK++++ ++M                               IS Y Q   + EAL +F E
Sbjct: 365 EKDVVSWSAM-------------------------------ISGYAQHECFSEALALFQE 393

Query: 371 MNSRGIKIDEVVVISVLSAC 430
           M   G++ DE  ++S +SAC
Sbjct: 394 MQLHGVRPDETALVSAISAC 413



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 39/179 (21%)
 Frame = +2

Query: 11  DVYARNTLINMYAVCGDMTDARKVFDESPMKDSVSWNSILAGYVQMGNVEEAKLIFDQMP 190
           D+ + N++I+ Y  CG + DA  +F   P KD VSW+++++GY Q     EA  +F +M 
Sbjct: 336 DLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQ 395

Query: 191 ---------------------------------------EKNIIASNSMIVLFGRCGLIA 253
                                                  + N+I S ++I ++ +CG + 
Sbjct: 396 LHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVE 455

Query: 254 EAYQLFVDMNEKDLVSWTAVISCYEQTGMYQEALVMFMEMNSRGIKIDEVVVISVLSAC 430
            A ++F  M EK + +W AVI      G  +++L MF +M   G   +E+  + VL AC
Sbjct: 456 NALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGAC 514


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