BLASTX nr result

ID: Atractylodes21_contig00039784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039784
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...    60   2e-07
ref|XP_002519860.1| hypothetical protein RCOM_0865550 [Ricinus c...    56   3e-06

>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1265

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = -2

Query: 320  KGN-KSLQIRGFNHFPKGIENIITHVELVFLIDNKFESLLSGLDASTLNELKGCLKGCWI 144
            +GN  S+++ GF  +P G+E ++   E + L++N F   LS L + TL      LK CW+
Sbjct: 1055 RGNVPSIELCGFEKYPTGVEYVLEQTECISLVENGFMKGLSSLGSDTLK-----LKHCWL 1109

Query: 143  ERCDKMVTIFNE-KDGKDDPNSVLALEDLAISNNRGLESIYDGK 15
            ERC +M  IF++ KD K   N    LE L +SN   L+S+   K
Sbjct: 1110 ERCTEMENIFSDHKDVKLGEN----LEVLWVSNLTKLKSLCSWK 1149


>ref|XP_002519860.1| hypothetical protein RCOM_0865550 [Ricinus communis]
           gi|223540906|gb|EEF42464.1| hypothetical protein
           RCOM_0865550 [Ricinus communis]
          Length = 301

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -2

Query: 311 KSLQIRGFNHFPKGIENIITHVELVFLIDNKFESLLSGLDASTLNELKGCLKGCWIERCD 132
           ++++IRGF+ FP G++N++  VE + L++N F S LS L    L +    +KG W+E+C 
Sbjct: 216 QTMEIRGFDEFPTGLDNVLKDVEYLSLVENPFMSRLSDLGIVNLRK----IKGFWLEKCS 271

Query: 131 KMVTIF-NEKDGK 96
           K+ +I  +E D K
Sbjct: 272 KLKSILCDETDVK 284


Top