BLASTX nr result

ID: Atractylodes21_contig00039697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039697
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li...   182   3e-44
emb|CBI19949.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li...   174   7e-42
ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   171   6e-41

>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
          Length = 572

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/115 (76%), Positives = 100/115 (86%)
 Frame = -3

Query: 345 KGEECTISDTNNAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGFMPSWVF 166
           K E  T +  ++ FFD+YGP+AKA V FKTP+A+STLNL+DVQGLVTWVLAEGFMPSW+F
Sbjct: 14  KPESATNATASSTFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIF 73

Query: 165 IKNKPLIPKVVLLYVPGLDAAIYLSQSKILHSLKESCGIPRAVLAPSCVSDGMQT 1
           IKNKPLIPKVV+LYVPGLDAA+Y+SQSKIL  LKE CG PRAVLA SCVSD MQT
Sbjct: 74  IKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQT 128


>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/115 (76%), Positives = 100/115 (86%)
 Frame = -3

Query: 345 KGEECTISDTNNAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGFMPSWVF 166
           K E  T +  ++ FFD+YGP+AKA V FKTP+A+STLNL+DVQGLVTWVLAEGFMPSW+F
Sbjct: 14  KPESATNATASSTFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIF 73

Query: 165 IKNKPLIPKVVLLYVPGLDAAIYLSQSKILHSLKESCGIPRAVLAPSCVSDGMQT 1
           IKNKPLIPKVV+LYVPGLDAA+Y+SQSKIL  LKE CG PRAVLA SCVSD MQT
Sbjct: 74  IKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQT 128


>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 576

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/138 (64%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
 Frame = -3

Query: 411 FLVLGEPFLLSSETMNSPVNSRKGEECTISDTN-NAFFDVYGPQAKAGVEFKTPEANSTL 235
           F V+    + SSE  N  +   + EE + S+     F+DVYGP+ KA + F +PE NSTL
Sbjct: 2   FQVVAAERMGSSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNSTL 61

Query: 234 NLEDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVLLYVPGLDAAIYLSQSKILHSLKESC 55
           NL DVQGLVTWVL+EGFMPSWVFIKNKPLIPKVV+LYVPGLDAA++LSQSK+L  LK+ C
Sbjct: 62  NLSDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKKFC 121

Query: 54  GIPRAVLAPSCVSDGMQT 1
           G PRA+LA SCVSDGMQT
Sbjct: 122 GKPRALLALSCVSDGMQT 139


>ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|222856924|gb|EEE94471.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/127 (66%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
 Frame = -3

Query: 378 SETMNSPVNSRKGEECTISDTNNAFFDVYGPQAKAGVEFKTP-EANSTLNLEDVQGLVTW 202
           S    S V   K  +C+ S   N F+D+YGP A+A V +KTP E +STLNL+DVQGLVTW
Sbjct: 4   SAERKSEVKEEKTSDCSSSSKGNKFYDIYGPDARAEVVYKTPPETSSTLNLQDVQGLVTW 63

Query: 201 VLAEGFMPSWVFIKNKPLIPKVVLLYVPGLDAAIYLSQSKILHSLKESCGIPRAVLAPSC 22
           VL+EGFMPSWVFIKNKPLIPKVV+LYVPGLDAA+Y+SQSK+L   KE CG P  +L+ SC
Sbjct: 64  VLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALYISQSKLLAGFKECCGNPMPLLSLSC 123

Query: 21  VSDGMQT 1
           VSDGMQT
Sbjct: 124 VSDGMQT 130


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
           rnase h, putative [Ricinus communis]
          Length = 572

 Score =  171 bits (433), Expect = 6e-41
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = -3

Query: 357 VNSRKGEECTISDTN--NAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGF 184
           V+S K ++ T +  N  N +FD+YGPQAKA + FK PEAN TLNLEDVQGLVTWVLAEGF
Sbjct: 15  VSSSKEDDSTDNCNNITNNYFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLVTWVLAEGF 74

Query: 183 MPSWVFIKNKPLIPKVVLLYVPGLDAAIYLSQSKILHSLKESCGIPRAVLAPSCVSDGMQ 4
           MPSWVFIKNKPLIPKV +L++PGLDA++YLS SK+L S KE C  PRA+LA SCVSD MQ
Sbjct: 75  MPSWVFIKNKPLIPKVAMLFIPGLDASLYLSHSKLLASFKEYCSNPRALLALSCVSDVMQ 134

Query: 3   T 1
           T
Sbjct: 135 T 135


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