BLASTX nr result

ID: Atractylodes21_contig00039681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039681
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22850.3| unnamed protein product [Vitis vinifera]              238   4e-61
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi...   238   4e-61
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,...   236   2e-60
ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-54
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50

>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  238 bits (607), Expect = 4e-61
 Identities = 116/143 (81%), Positives = 131/143 (91%)
 Frame = -1

Query: 430 EKDITLALEYFKSISNSKTFKHTSLTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSED 251
           E DITLALEYFKSI+NSK+FKHT LTYQ +IEKL  E ++D VQYLLQQMKLEG+SCSED
Sbjct: 53  EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 250 LFISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNM 71
           LFISVI SYRRAG+++QALKTFYR+QDF  KPTVKIYNH+LDALL+ENRF MINPIYSNM
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 70  KRDGMEPDKYTYNILLKALCKNN 2
           K+DGMEP+ +TYNILLKALCKNN
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNN 195


>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  238 bits (607), Expect = 4e-61
 Identities = 116/143 (81%), Positives = 131/143 (91%)
 Frame = -1

Query: 430 EKDITLALEYFKSISNSKTFKHTSLTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSED 251
           E DITLALEYFKSI+NSK+FKHT LTYQ +IEKL  E ++D VQYLLQQMKLEG+SCSED
Sbjct: 53  EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 250 LFISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNM 71
           LFISVI SYRRAG+++QALKTFYR+QDF  KPTVKIYNH+LDALL+ENRF MINPIYSNM
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 70  KRDGMEPDKYTYNILLKALCKNN 2
           K+DGMEP+ +TYNILLKALCKNN
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNN 195


>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 665

 Score =  236 bits (601), Expect = 2e-60
 Identities = 112/143 (78%), Positives = 127/143 (88%)
 Frame = -1

Query: 430 EKDITLALEYFKSISNSKTFKHTSLTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSED 251
           E DI LA  YF+SI+NSK F+HT LTYQ +IEKLG ECD+DGVQYLLQQMKLEG+SCSED
Sbjct: 56  ETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSED 115

Query: 250 LFISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNM 71
           LFI+VI +YRR G A+QALK FYRI++FGC+PTVKIYNHLLDA+L+ENRF MI PIYSNM
Sbjct: 116 LFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNM 175

Query: 70  KRDGMEPDKYTYNILLKALCKNN 2
           KRDG EP+ YTYNILLKALCKNN
Sbjct: 176 KRDGKEPNVYTYNILLKALCKNN 198



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = -1

Query: 247 FISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNMK 68
           FI  +C    +G  + A+  F +++ +GC P +K YN +LD LL ENR      + + M+
Sbjct: 465 FIKGLCC---SGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521

Query: 67  RDGMEPDKYTYNILLKALC 11
             GME +  TYN +    C
Sbjct: 522 EKGMELNLVTYNTIFGGFC 540


>ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|222864008|gb|EEF01139.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  214 bits (546), Expect = 4e-54
 Identities = 102/143 (71%), Positives = 126/143 (88%)
 Frame = -1

Query: 430 EKDITLALEYFKSISNSKTFKHTSLTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSED 251
           E +I LAL +FKSI+NS +FKHT LTY T+I++LG E D+DG+QYLLQ MKLEG+SC+ED
Sbjct: 50  EPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNED 109

Query: 250 LFISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNM 71
           LF+ VI +YRRAG A+QALKTFYRI +FGCKP+VKIYNH+LDALL+EN+F MIN IY+NM
Sbjct: 110 LFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNM 169

Query: 70  KRDGMEPDKYTYNILLKALCKNN 2
           KRDG+E + YTYN+LLKALCKN+
Sbjct: 170 KRDGIELNVYTYNMLLKALCKND 192


>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  202 bits (513), Expect = 3e-50
 Identities = 88/143 (61%), Positives = 123/143 (86%)
 Frame = -1

Query: 430 EKDITLALEYFKSISNSKTFKHTSLTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSED 251
           +++++  L +F +I+NS  F+HT+ TY+ +IE+LG EC++D VQY+LQQMK++G++C ED
Sbjct: 51  DRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCED 110

Query: 250 LFISVICSYRRAGAADQALKTFYRIQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNM 71
           LFI +I  Y+R G+A+QALK FYRI +FGCKPTV+IYNHLLDALL+EN+F MINP+Y+NM
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170

Query: 70  KRDGMEPDKYTYNILLKALCKNN 2
           K+DG+ P+ +TYNILLKALCKN+
Sbjct: 171 KKDGLIPNVFTYNILLKALCKND 193



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/112 (28%), Positives = 56/112 (50%)
 Frame = -1

Query: 358 LTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSEDLFISVICSYRRAGAADQALKTFYR 179
           +TY  +++ L      D    L+++M LEG + +   F + I      G  + A+K   R
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 178 IQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNMKRDGMEPDKYTYNILL 23
           +Q  GC P +  YN LLDAL   N++     ++  ++   ++P+  TYN +L
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/118 (26%), Positives = 54/118 (45%)
 Frame = -1

Query: 358 LTYQTIIEKLGDECDLDGVQYLLQQMKLEGVSCSEDLFISVICSYRRAGAADQALKTFYR 179
           + Y T+I  L     L+    +  QM+  G   +   +  +I  + ++G    A +T+ R
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 178 IQDFGCKPTVKIYNHLLDALLNENRFHMINPIYSNMKRDGMEPDKYTYNILLKALCKN 5
           +   GC+P V  Y  ++D L   + F   N +   M  +G  P+  T+N  +K LC N
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467


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