BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039666
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   285   7e-75
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   261   8e-68
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   238   8e-61
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   238   1e-60
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...   237   2e-60

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
            gi|297738371|emb|CBI27572.3| unnamed protein product
            [Vitis vinifera]
          Length = 623

 Score =  285 bits (728), Expect = 7e-75
 Identities = 137/202 (67%), Positives = 167/202 (82%), Gaps = 5/202 (2%)
 Frame = +2

Query: 5    LEVLRRLKDYVDYMGSAARVILVPSIRDAHHDYVFPQPAFDISVADLKHEITCIANPGII 184
            LE+LRRL+DYV+YMGSAARVILVPSIRDA+HD+VFPQPAF I   DLKH+IT + NPG+ 
Sbjct: 422  LEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPAFSIHPPDLKHQITSLTNPGMF 481

Query: 185  SAKKVKIGCCSVDVLKHLSTDVVSRG-----IKNRMNTLMNHLLSQRSFYPLYPPAEDTP 349
             A +VK+GCC+VDV+K LS +++SR       ++RM T+ NH+LSQRSFYPLYP AE  P
Sbjct: 482  DANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLAEGIP 541

Query: 350  VDLSLSPEALQMSTIPDILITPSDLTHFVKVLRVEGTSEGEEEVKCMCVNPGRLARGEGG 529
            +D SL+PEAL++STIPD+LI PSDL  FVKVL + G +EGEE VKC+CVNPGRLA+GEGG
Sbjct: 542  LDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRNEGEELVKCICVNPGRLAKGEGG 601

Query: 530  GHFVELNFHACPDSSSASVIRI 595
            GHFVELN+   PD +SASVIRI
Sbjct: 602  GHFVELNYQGSPDKTSASVIRI 623


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
            gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
            putative [Ricinus communis]
          Length = 621

 Score =  261 bits (667), Expect = 8e-68
 Identities = 121/203 (59%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
 Frame = +2

Query: 2    RLEVLRRLKDYVDYMGSAARVILVPSIRDAHHDYVFPQPAFDISVADLKHEITCIANPGI 181
            R E+LRRL+DYV+YMGS A+V++VPS RDA+HD+VFPQPAFDI  ++L+H+I  + NPGI
Sbjct: 419  RQEILRRLQDYVEYMGSDAQVLIVPSTRDANHDFVFPQPAFDIHRSNLQHQIRSLTNPGI 478

Query: 182  ISAKKVKIGCCSVDVLKHLSTDVVSRGI-----KNRMNTLMNHLLSQRSFYPLYPPAEDT 346
              A +V++GCC+VD++K L ++ +SR        NRM+ L NH+LSQRSFYPLYPPAED 
Sbjct: 479  FEANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNRMSRLANHILSQRSFYPLYPPAEDV 538

Query: 347  PVDLSLSPEALQMSTIPDILITPSDLTHFVKVLRVEGTSEGEEEVKCMCVNPGRLARGEG 526
            P+D SL+PEAL + ++P ILI PSD+ +F+KVL + G  EGEE+ KC+C+NPGRLA+GEG
Sbjct: 539  PLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKGEG 598

Query: 527  GGHFVELNFHACPDSSSASVIRI 595
            GG FVELN+   PD  +ASVI I
Sbjct: 599  GGTFVELNYRGSPDKMNASVIGI 621


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
            gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
            [Arabidopsis thaliana]
          Length = 620

 Score =  238 bits (607), Expect = 8e-61
 Identities = 115/202 (56%), Positives = 156/202 (77%), Gaps = 4/202 (1%)
 Frame = +2

Query: 2    RLEVLRRLKDYVDYMGSAARVILVPSIRDAHHDYVFPQPAFDISVADLKHEITCIANPGI 181
            ++EVLR+L+DYV++MGS  RV+LVPSIRDA+HD++FPQP FDI + DL+H++T ++NPG 
Sbjct: 422  QVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGT 481

Query: 182  ISAKKVKIGCCSVDVLKHLSTDVVSR---GI-KNRMNTLMNHLLSQRSFYPLYPPAEDTP 349
              A +VK+ CC+VDVLK LS + +S+   G+  +RM+ L +HLL QRSFYPLYPP E  P
Sbjct: 482  FEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLP 541

Query: 350  VDLSLSPEALQMSTIPDILITPSDLTHFVKVLRVEGTSEGEEEVKCMCVNPGRLARGEGG 529
             D SL+P+ALQ+S+IPDIL+ PSD+ +FVK+L +    E E+  KC+CVNPGRLA+GEG 
Sbjct: 542  YDSSLAPKALQISSIPDILLLPSDMRYFVKILSL---GEEEDAAKCVCVNPGRLAKGEGA 598

Query: 530  GHFVELNFHACPDSSSASVIRI 595
            G FVEL +   P+S  AS+I I
Sbjct: 599  GTFVELTYKGGPESMHASIISI 620


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
            lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
            subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  238 bits (606), Expect = 1e-60
 Identities = 115/202 (56%), Positives = 155/202 (76%), Gaps = 4/202 (1%)
 Frame = +2

Query: 2    RLEVLRRLKDYVDYMGSAARVILVPSIRDAHHDYVFPQPAFDISVADLKHEITCIANPGI 181
            ++EVLR+L+DYV++MGS  RV+LVPSIRDA+HD++FPQP FDI + DL+H++T ++NPG 
Sbjct: 421  QVEVLRKLRDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGT 480

Query: 182  ISAKKVKIGCCSVDVLKHLSTDVVSR---GI-KNRMNTLMNHLLSQRSFYPLYPPAEDTP 349
              A +VK+GCC+VDVLK LS + +S+   G+  +RM+ L +HLL QRSFYPLYPP E  P
Sbjct: 481  FEANQVKVGCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLP 540

Query: 350  VDLSLSPEALQMSTIPDILITPSDLTHFVKVLRVEGTSEGEEEVKCMCVNPGRLARGEGG 529
             D SL+P+ALQ+ +IPDIL+ PSD+ +FVK+L +    E E   KC+CVNPGRLA+GEG 
Sbjct: 541  YDSSLAPKALQILSIPDILLLPSDMRYFVKILSL---GEEENAAKCVCVNPGRLAKGEGA 597

Query: 530  GHFVELNFHACPDSSSASVIRI 595
            G FVEL +   P+S  AS+I I
Sbjct: 598  GTFVELTYKGGPESMRASIISI 619


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
            gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
            thaliana]
          Length = 620

 Score =  237 bits (604), Expect = 2e-60
 Identities = 114/202 (56%), Positives = 156/202 (77%), Gaps = 4/202 (1%)
 Frame = +2

Query: 2    RLEVLRRLKDYVDYMGSAARVILVPSIRDAHHDYVFPQPAFDISVADLKHEITCIANPGI 181
            ++EVLR+L+DYV++MGS  RV+LVPSIRDA+HD++FPQP FDI + DL+H++T ++NPG 
Sbjct: 422  QVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGT 481

Query: 182  ISAKKVKIGCCSVDVLKHLSTDVVSR---GI-KNRMNTLMNHLLSQRSFYPLYPPAEDTP 349
              A +VK+ CC+VDVLK LS + +S+   G+  +RM+ L +HLL QRSFYPLYPP E  P
Sbjct: 482  FEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLP 541

Query: 350  VDLSLSPEALQMSTIPDILITPSDLTHFVKVLRVEGTSEGEEEVKCMCVNPGRLARGEGG 529
             D SL+P+ALQ+S+IPDIL+ PSD+ +FVK+L +    E E+  KC+CVNPGRLA+GEG 
Sbjct: 542  YDSSLAPKALQISSIPDILLLPSDMRYFVKILSL---GEEEDAAKCVCVNPGRLAKGEGA 598

Query: 530  GHFVELNFHACPDSSSASVIRI 595
            G +VEL +   P+S  AS+I I
Sbjct: 599  GTYVELTYKGGPESMHASIISI 620