BLASTX nr result

ID: Atractylodes21_contig00039638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039638
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                52   7e-08
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   9e-07

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 52.4 bits (124), Expect(2) = 7e-08
 Identities = 29/84 (34%), Positives = 47/84 (55%)
 Frame = -2

Query: 253 KEMLGESRGSSHQT*DIWWCNEDLQMGIKEKKDAINLRLESGCKNVVSTKKYTKGNREAR 74
           KE+LGES+G +    + WW NE++Q  +K KK+      +   +   + ++Y K  +EA+
Sbjct: 402 KEVLGESKGFAPHQKESWWWNEEVQTKVKAKKECCKALYKD--RTDENGERYRKAKQEAK 459

Query: 73  KALREIAGKTYEG*PYKKLGQKRG 2
           KA+RE     Y+   YK+L  K G
Sbjct: 460 KAVREAKLAAYDD-MYKRLDTKEG 482



 Score = 28.9 bits (63), Expect(2) = 7e-08
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 384 WWNPEGDNASIFNYQMINNGAFDS*GNANRTWNESTKYI 268
           WWN + +  +IF  ++I    +D  G A++ W+     I
Sbjct: 359 WWNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCI 397


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = -2

Query: 268 LKGSKKEMLGESRGSSHQT*DIWWCNEDLQMGIKEKKDAINLRLESGCKNVVSTKKYTKG 89
           +K   KE LGESRG   +  + WW N+++Q  ++ K+D    +  S CKNV +  KY   
Sbjct: 9   IKKVAKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDC--FKDWSRCKNVETWDKYKIA 66

Query: 88  NREARKALREIAGKTYEG*PYKKLGQKRG 2
            +EA+K + E   + +EG  Y+ LG K G
Sbjct: 67  RKEAKKVVSEARTQAFEG-LYQSLGTKEG 94


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