BLASTX nr result

ID: Atractylodes21_contig00039613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039613
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...    74   9e-12
ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CBI30461.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
           gi|223525738|gb|EEF28202.1| hypothetical protein
           RCOM_0303160 [Ricinus communis]
          Length = 937

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
 Frame = +1

Query: 34  NPSVEQLTTVEDCMKFDLDRGEQPSLKGRHSSFNRRVSFSLDKMXXXXXXXXXXXXPQLS 213
           N S E L  +E     D +  E  S KGRH S NRR SFSL +M            PQL+
Sbjct: 451 NSSNENL--LETLRTLDQETAELDSRKGRHPSPNRRFSFSLGRMTRSFSFKETSGIPQLT 508

Query: 214 STYNSLKTRPVTFGYSPDLHNYNSKKGNATNIVRSIPMRRLLD-TLKHKGR--QHAEKVE 384
           STY S+K+ PV    S DL N N +K +  N  RS P+RR+LD  LK KG   Q++   +
Sbjct: 509 STYVSVKSGPVISKASADLGNSNREKASGHNRARSSPLRRILDPLLKSKGSNLQNSSGTD 568

Query: 385 QSN 393
           QS+
Sbjct: 569 QSS 571


>ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|222854169|gb|EEE91716.1|
           predicted protein [Populus trichocarpa]
          Length = 979

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 44/116 (37%), Positives = 56/116 (48%)
 Frame = +1

Query: 55  TTVEDCMKFDLDRGEQPSLKGRHSSFNRRVSFSLDKMXXXXXXXXXXXXPQLSSTYNSLK 234
           + +E     D +  E  + KGRH S NRR SFSL +M            PQLSSTY S K
Sbjct: 487 SVIETSNTLDQETMEVMARKGRHPSPNRRFSFSLSRMSRSFSFKESSTVPQLSSTYISTK 546

Query: 235 TRPVTFGYSPDLHNYNSKKGNATNIVRSIPMRRLLDTLKHKGRQHAEKVEQSNGNL 402
           + PV       L N N +K +  N  RS P+RR+LD L  K R     +   N +L
Sbjct: 547 SGPVISEGFACLDNSNREKASGHNRARSSPLRRMLDPLL-KSRSSRTLLSAENDSL 601


>ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|222867566|gb|EEF04697.1|
           predicted protein [Populus trichocarpa]
          Length = 1005

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/98 (37%), Positives = 47/98 (47%)
 Frame = +1

Query: 55  TTVEDCMKFDLDRGEQPSLKGRHSSFNRRVSFSLDKMXXXXXXXXXXXXPQLSSTYNSLK 234
           + VE     D ++ E    K RH   NR  SFSL +M            PQ SSTY S+ 
Sbjct: 516 SVVETSNALDQEKVELMPRKVRHPLPNRWFSFSLSRMSRSFSFKESSAVPQFSSTYISIN 575

Query: 235 TRPVTFGYSPDLHNYNSKKGNATNIVRSIPMRRLLDTL 348
           + P+    S  L+N N KK    N  RS P+RR+LD L
Sbjct: 576 SGPLISEGSACLNNSNRKKAGGHNRARSSPLRRMLDPL 613


>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
 Frame = +1

Query: 1   IQHSCPFP-----------------------LGTNPSVEQLTTVEDCMKFDLDRGEQPSL 111
           I HSCP P                       L +N      + +E   K DL+     + 
Sbjct: 355 IPHSCPLPCREELYTKSDMKPQSMNITQGMELPSNACHMSPSVIEMSKKQDLE-----TA 409

Query: 112 KGRHSSFNRRVSFSLDKMXXXXXXXXXXXXPQLSSTYNSLKTRPVTFGYSPDLHNYNSKK 291
           KGR+ S NRR +  L +M            PQLSSTY ++++ P     S    N + +K
Sbjct: 410 KGRNPSPNRRFTLGLARMSRSFSFKEGSALPQLSSTYVTVRSGPAKSESSACSVNSSREK 469

Query: 292 GNATNIVRSIPMRRLLDTLKHKGR----QHAEKVEQSNGNL 402
            NA +  RS P+RRLLD L         Q AE V+   G+L
Sbjct: 470 ANANSRARSSPLRRLLDPLLRPKAANLLQSAETVQALEGSL 510


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