BLASTX nr result

ID: Atractylodes21_contig00039579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039579
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264896.1| PREDICTED: root phototropism protein 2 [Viti...   184   6e-45
ref|XP_004147730.1| PREDICTED: root phototropism protein 2-like ...   182   3e-44
ref|XP_002533880.1| Root phototropism protein, putative [Ricinus...   181   7e-44
ref|XP_002319980.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
gb|AAF33112.1|AF181683_1 RPT2 [Arabidopsis thaliana]                  174   7e-42

>ref|XP_002264896.1| PREDICTED: root phototropism protein 2 [Vitis vinifera]
          Length = 572

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/129 (68%), Positives = 104/129 (80%)
 Frame = -2

Query: 388 AAKFCYGMDFEITASNVAALHCAAEYLQMTDHYCDGNLAGRTYSFLSHEALSSLSGAITV 209
           AAKFCYG++FEIT  NVAAL CAAEYLQMTD YCDGNL+GRT  FL   AL+SLSGA+ V
Sbjct: 84  AAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDGNLSGRTEDFLKQVALTSLSGAVVV 143

Query: 208 LKSCENLLPMAEQLNIVHQCVEVASAEAFNETNSPGCSPPNWWEEELSVVHITFFQRIID 29
           LKSCE+LLP AE+L IV +CV+VAS +A NE N P  SPPNWW EELS++ I FF++II 
Sbjct: 144 LKSCEDLLPKAEELKIVQRCVDVASTKACNEANFPSRSPPNWWTEELSILDIGFFEKIIA 203

Query: 28  SMKSRGTKA 2
           +MK RG K+
Sbjct: 204 AMKLRGAKS 212


>ref|XP_004147730.1| PREDICTED: root phototropism protein 2-like [Cucumis sativus]
           gi|449514615|ref|XP_004164428.1| PREDICTED: root
           phototropism protein 2-like [Cucumis sativus]
          Length = 582

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/129 (69%), Positives = 101/129 (78%)
 Frame = -2

Query: 388 AAKFCYGMDFEITASNVAALHCAAEYLQMTDHYCDGNLAGRTYSFLSHEALSSLSGAITV 209
           AAKFCYG++FEIT  NVAAL CAAEYLQMTD YCD NL GRT  FLS  ALSSLSGAI V
Sbjct: 84  AAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDNNLIGRTEDFLSQVALSSLSGAIVV 143

Query: 208 LKSCENLLPMAEQLNIVHQCVEVASAEAFNETNSPGCSPPNWWEEELSVVHITFFQRIID 29
           LKS   LLPMAE L IVH+CV+V S++A NE N P  SPPNWW EEL+++ I FF +II 
Sbjct: 144 LKSSHLLLPMAEDLYIVHRCVDVISSKACNEANFPSRSPPNWWTEELTIIDIEFFAKIIT 203

Query: 28  SMKSRGTKA 2
           +MKSRG KA
Sbjct: 204 AMKSRGAKA 212


>ref|XP_002533880.1| Root phototropism protein, putative [Ricinus communis]
           gi|223526172|gb|EEF28503.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 549

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/129 (68%), Positives = 99/129 (76%)
 Frame = -2

Query: 388 AAKFCYGMDFEITASNVAALHCAAEYLQMTDHYCDGNLAGRTYSFLSHEALSSLSGAITV 209
           AAKFCYG++FEIT  NVAAL CAAEYLQMTD YCD NLAGRT  FL   ALSSLSGA+ V
Sbjct: 59  AAKFCYGVNFEITVQNVAALRCAAEYLQMTDLYCDNNLAGRTDDFLGQVALSSLSGAVVV 118

Query: 208 LKSCENLLPMAEQLNIVHQCVEVASAEAFNETNSPGCSPPNWWEEELSVVHITFFQRIID 29
           LKSCE+LLPMAE L IV +CV V S +A NE N P  SPPNWW EELS++ I F  +II 
Sbjct: 119 LKSCEDLLPMAEDLKIVQRCVNVISIKACNEANFPSRSPPNWWTEELSILDIEFVGKIIS 178

Query: 28  SMKSRGTKA 2
           +MK RG KA
Sbjct: 179 AMKQRGAKA 187


>ref|XP_002319980.1| predicted protein [Populus trichocarpa] gi|222858356|gb|EEE95903.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/129 (68%), Positives = 101/129 (78%)
 Frame = -2

Query: 388 AAKFCYGMDFEITASNVAALHCAAEYLQMTDHYCDGNLAGRTYSFLSHEALSSLSGAITV 209
           AAKFCYG++FEIT  NVAAL CAAEYLQMTD YCD NLAGRT  FL+  ALSSLSGAI V
Sbjct: 84  AAKFCYGVNFEITVHNVAALRCAAEYLQMTDVYCDYNLAGRTEDFLAQVALSSLSGAIVV 143

Query: 208 LKSCENLLPMAEQLNIVHQCVEVASAEAFNETNSPGCSPPNWWEEELSVVHITFFQRIID 29
           LKSCE+LLP+AE L IV +CV+V S +A NE N P  +PPNWW EELS++ I F  RI+ 
Sbjct: 144 LKSCEDLLPLAEDLKIVQRCVDVISLKACNEANFPSRTPPNWWTEELSILDIEFIGRILS 203

Query: 28  SMKSRGTKA 2
            MK RG+KA
Sbjct: 204 GMKKRGSKA 212


>gb|AAF33112.1|AF181683_1 RPT2 [Arabidopsis thaliana]
          Length = 593

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/128 (64%), Positives = 97/128 (75%)
 Frame = -2

Query: 388 AAKFCYGMDFEITASNVAALHCAAEYLQMTDHYCDGNLAGRTYSFLSHEALSSLSGAITV 209
           AAKFCYG++FEIT  NVAALHCAAE+LQMTD YCD NLAGRT  FLS  ALSSLSGAI V
Sbjct: 87  AAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVV 146

Query: 208 LKSCENLLPMAEQLNIVHQCVEVASAEAFNETNSPGCSPPNWWEEELSVVHITFFQRIID 29
           LKSCE LLP++  L IV +CV+V  A+A NE   P  +PPNWW EEL ++ + FF  ++ 
Sbjct: 147 LKSCEILLPISRDLGIVRRCVDVVGAKACNEAMFPCRTPPNWWTEELCILDVDFFSDVVS 206

Query: 28  SMKSRGTK 5
           SMK RG K
Sbjct: 207 SMKQRGVK 214


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