BLASTX nr result

ID: Atractylodes21_contig00039558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039558
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   204   8e-51
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              204   8e-51
ref|XP_004147431.1| PREDICTED: pre-mRNA-processing factor 39-lik...   196   2e-48
ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   185   3e-45
gb|ABF69956.1| pre-mRNA processing protein-related [Musa acuminata]   184   8e-45

>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  204 bits (518), Expect = 8e-51
 Identities = 89/135 (65%), Positives = 113/135 (83%)
 Frame = -1

Query: 410 KFIAIGERFYRKACQLHEEIDYFENYMERDFFHVEPLEGEQLENWHNYLDFVEKQEDFDW 231
           K+++IGE+ Y+KACQ+  +I  FE ++ R +FHV+PL+  QLENWH YLDFVE Q DFDW
Sbjct: 281 KYLSIGEQLYQKACQVDAKIHGFETHIRRPYFHVKPLDVSQLENWHQYLDFVEVQGDFDW 340

Query: 230 AVKLYERCLIPCANYPEFWMRYVEFMESKGGREIANFALERATQVFLKNVSEVHIFNARF 51
           AVKLYERCLIPCANYPEFWMRYVEFME KGGREIANFAL+R+T++FLK++  +H+FNA F
Sbjct: 341 AVKLYERCLIPCANYPEFWMRYVEFMEIKGGREIANFALDRSTKIFLKSIPAIHVFNAWF 400

Query: 50  REKIGDIEGARTALL 6
           +E+ GD+ GA  A +
Sbjct: 401 KEQTGDVFGAHAAFV 415


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  204 bits (518), Expect = 8e-51
 Identities = 89/135 (65%), Positives = 113/135 (83%)
 Frame = -1

Query: 410 KFIAIGERFYRKACQLHEEIDYFENYMERDFFHVEPLEGEQLENWHNYLDFVEKQEDFDW 231
           K+++IGE+ Y+KACQ+  +I  FE ++ R +FHV+PL+  QLENWH YLDFVE Q DFDW
Sbjct: 236 KYLSIGEQLYQKACQVDAKIHGFETHIRRPYFHVKPLDVSQLENWHQYLDFVEVQGDFDW 295

Query: 230 AVKLYERCLIPCANYPEFWMRYVEFMESKGGREIANFALERATQVFLKNVSEVHIFNARF 51
           AVKLYERCLIPCANYPEFWMRYVEFME KGGREIANFAL+R+T++FLK++  +H+FNA F
Sbjct: 296 AVKLYERCLIPCANYPEFWMRYVEFMEIKGGREIANFALDRSTKIFLKSIPAIHVFNAWF 355

Query: 50  REKIGDIEGARTALL 6
           +E+ GD+ GA  A +
Sbjct: 356 KEQTGDVFGAHAAFV 370


>ref|XP_004147431.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 901

 Score =  196 bits (497), Expect = 2e-48
 Identities = 87/135 (64%), Positives = 111/135 (82%)
 Frame = -1

Query: 410 KFIAIGERFYRKACQLHEEIDYFENYMERDFFHVEPLEGEQLENWHNYLDFVEKQEDFDW 231
           K++  GE+ Y +ACQL E+I +FE+ + R +FHV+PL+  QL+NWH+YLD VE   DFDW
Sbjct: 255 KYVHAGEKLYDEACQLKEKIMHFEDKIRRTYFHVKPLDDGQLKNWHSYLDLVEMYGDFDW 314

Query: 230 AVKLYERCLIPCANYPEFWMRYVEFMESKGGREIANFALERATQVFLKNVSEVHIFNARF 51
           AVKLYERCLIPCA+YPEFWMRYVEF+E+KGGRE+A FALERAT+ FLK V  +H+FN+RF
Sbjct: 315 AVKLYERCLIPCASYPEFWMRYVEFVETKGGRELAMFALERATKTFLKKVPVIHLFNSRF 374

Query: 50  REKIGDIEGARTALL 6
           +E+I D+ GAR A L
Sbjct: 375 KEQIRDLSGARAAFL 389


>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 1215

 Score =  185 bits (470), Expect = 3e-45
 Identities = 79/135 (58%), Positives = 107/135 (79%)
 Frame = -1

Query: 410 KFIAIGERFYRKACQLHEEIDYFENYMERDFFHVEPLEGEQLENWHNYLDFVEKQEDFDW 231
           K+  IGE+ Y  AC+L+ +I  FE  ++R +F   PL+  QL+NWH YLDF+E   DFDW
Sbjct: 262 KYRIIGEQLYHNACELYSKISSFEANIQRYYFDFRPLDANQLQNWHAYLDFIELHGDFDW 321

Query: 230 AVKLYERCLIPCANYPEFWMRYVEFMESKGGREIANFALERATQVFLKNVSEVHIFNARF 51
           AVKLYERCLI CANYP++WMRY +FME+KGGREIAN++L+RAT+++LK+V  +H+FNARF
Sbjct: 322 AVKLYERCLIVCANYPDYWMRYADFMEAKGGREIANYSLDRATEIYLKSVPAIHLFNARF 381

Query: 50  REKIGDIEGARTALL 6
           +E+IGD+  AR A +
Sbjct: 382 KEQIGDVLAARAAYI 396


>gb|ABF69956.1| pre-mRNA processing protein-related [Musa acuminata]
          Length = 519

 Score =  184 bits (466), Expect = 8e-45
 Identities = 83/135 (61%), Positives = 107/135 (79%)
 Frame = -1

Query: 410 KFIAIGERFYRKACQLHEEIDYFENYMERDFFHVEPLEGEQLENWHNYLDFVEKQEDFDW 231
           KF++IG++ Y+++ Q+ E+I  FE ++ R++FHV+PL+  QLENWH+YLDFVE Q DFDW
Sbjct: 203 KFLSIGQQLYQRSRQIDEKISCFEAHIRRNYFHVKPLDSGQLENWHHYLDFVETQGDFDW 262

Query: 230 AVKLYERCLIPCANYPEFWMRYVEFMESKGGREIANFALERATQVFLKNVSEVHIFNARF 51
            VKLYERCLI CANY EFW+RYVEF+E+KGGRE+AN AL RA  VFLK V    I++A F
Sbjct: 263 IVKLYERCLIACANYSEFWIRYVEFVEAKGGRELANHALTRAVTVFLKKVPAFCIYSAMF 322

Query: 50  REKIGDIEGARTALL 6
           +EKIGD+ GAR   L
Sbjct: 323 KEKIGDVSGARALFL 337


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